About lab
Curated microbiology lab for Heldt2018 - Budding yeast size control by titration of nuclear sites. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.
Runtime
Duration10
Comms Step0.01
Runs
Total0
Completed0
Failed0
Metadata
Packageheldt2018-budding-yeast-size-control
Created2026-05-15
Updated2026-06-13
microbiologysbmlbiomodels_ebifaithfultelluriumvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "total_cln3",
"maps_to": "heldt2018_budding_yeast_size_control.total_cln3"
},
{
"name": "total_whi5",
"maps_to": "heldt2018_budding_yeast_size_control.total_whi5"
}
],
"outputs": [
{
"name": "state",
"maps_to": "heldt2018_budding_yeast_size_control.state"
},
{
"name": "summary",
"maps_to": "heldt2018_budding_yeast_size_control.summary"
},
{
"name": "species_labels",
"maps_to": "heldt2018_budding_yeast_size_control.species_labels"
},
{
"name": "titration_module_state",
"maps_to": "heldt2018_budding_yeast_size_control.titration_module_state"
},
{
"name": "growth_initiation_state",
"maps_to": "heldt2018_budding_yeast_size_control.growth_initiation_state"
},
{
"name": "growth_division_state",
"maps_to": "heldt2018_budding_yeast_size_control.growth_division_state"
},
{
"name": "growth_initiation_titration_complex",
"maps_to": "heldt2018_budding_yeast_size_control.growth_initiation_titration_complex"
}
]
},
"title": "Heldt2018 - Budding yeast size control by titration of nuclear sites Lab",
"models": [
{
"path": "models/core",
"alias": "heldt2018_budding_yeast_size_control"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.heldt2018_budding_yeast_size_control_state"
],
"from": "heldt2018_budding_yeast_size_control.state"
},
{
"to": [
"visualisation.heldt2018_budding_yeast_size_control_summary"
],
"from": "heldt2018_budding_yeast_size_control.summary"
},
{
"to": [
"visualisation.heldt2018_budding_yeast_size_control_species_labels"
],
"from": "heldt2018_budding_yeast_size_control.species_labels"
},
{
"to": [
"visualisation.heldt2018_budding_yeast_size_control_titration_module_state"
],
"from": "heldt2018_budding_yeast_size_control.titration_module_state"
},
{
"to": [
"visualisation.heldt2018_budding_yeast_size_control_growth_initiation_state"
],
"from": "heldt2018_budding_yeast_size_control.growth_initiation_state"
},
{
"to": [
"visualisation.heldt2018_budding_yeast_size_control_growth_division_state"
],
"from": "heldt2018_budding_yeast_size_control.growth_division_state"
},
{
"to": [
"visualisation.heldt2018_budding_yeast_size_control_growth_initiation_titration_complex"
],
"from": "heldt2018_budding_yeast_size_control.growth_initiation_titration_complex"
}
],
"package": "heldt2018-budding-yeast-size-control",
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 0.01
},
"version": "1.0.0",
"description": "Curated microbiology lab for Heldt2018 - Budding yeast size control by titration of nuclear sites. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.",
"schema_version": "2.0"
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