Lavigne2021 - Non-spatial model of viral infection dynamics and interferon response of well-mixed viral infection Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_infected_cells_antiviral",
        "label": "Initial Infected Cells Antiviral",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.initial_infected_cells_antiviral",
        "description": "Initial Infected Cells Antiviral. Sets the initial value of bundled SBML species `Infected_cells_antiviral`."
      },
      {
        "name": "initial_infected_cells",
        "label": "Initial Infected Cells",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.initial_infected_cells",
        "description": "Initial Infected Cells. Sets the initial value of bundled SBML species `Infected_cells`."
      },
      {
        "name": "initial_interferon",
        "label": "Initial Interferon",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.initial_interferon",
        "description": "Initial Interferon. Sets the initial value of bundled SBML species `IFN`."
      },
      {
        "name": "initial_target_cells",
        "label": "Initial Target Cells",
        "units": "native source value",
        "default": 400000000,
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.initial_target_cells",
        "description": "Initial Target Cells. Sets the initial value of bundled SBML species `Target_cells`."
      },
      {
        "name": "initial_refractory_cells",
        "label": "Initial Refractory Cells",
        "units": "native source value",
        "default": 0,
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.initial_refractory_cells",
        "description": "Initial Refractory Cells. Sets the initial value of bundled SBML species `Refractory_cells`."
      }
    ],
    "outputs": [
      {
        "name": "infected_cells_antiviral",
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.infected_cells_antiviral"
      },
      {
        "name": "infected_cells",
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.infected_cells"
      },
      {
        "name": "interferon",
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.interferon"
      },
      {
        "name": "target_cells",
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.target_cells"
      },
      {
        "name": "refractory_cells",
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.refractory_cells"
      },
      {
        "name": "state",
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.state"
      },
      {
        "name": "summary",
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.species_labels"
      }
    ]
  },
  "title": "Lavigne2021 - Non-spatial model of viral infection dynamics and interferon response of well-mixed viral infection Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model"
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model_state"
      ],
      "from": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.state"
    },
    {
      "to": [
        "visualisation.immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model_summary"
      ],
      "from": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.summary"
    },
    {
      "to": [
        "visualisation.immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model_species_labels"
      ],
      "from": "immunology_sbml_lavigne2021_non_spatial_model_of_viral_infection_biomd0000001021_model.species_labels"
    }
  ],
  "package": "lavigne2021-non-spatial-model-of-viral-infection-dynamics",
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "version": "1.0.0",
  "description": "This ordinary differential equation model is described in the following article:'Autocrine and paracrine interferon signalling as ‘ring vaccination’ and ‘contact tracing’ strategies to suppress virus. It can be used to explore immune response dynamics and compare pathway-level behavior across conditions.",
  "schema_version": "2.0"
}