About lab
Clean Biosimulant lab for MAPK/ERK receptor signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagecapuani2015-binding-of-cbl-and-gbr2-to-egfr-multisite-phosphoryl
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebiegfrvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_cbl_ubiquitin_ligase_factor_level",
"label": "Cbl ubiquitin ligase Factor",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.initial_cbl_ubiquitin_ligase_factor_level",
"description": "Cbl ubiquitin ligase Factor source parameter. Maps to SBML symbol `CblFactor` and preserves the bundled default."
},
{
"name": "initial_egfr_00uu",
"label": "Initial EGFR 00UU",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.initial_egfr_00uu",
"description": "Initial level of EGFR 00UU. Maps to SBML symbol `EGFR_00UU`; exposed as a traceable initial-condition perturbation."
},
{
"name": "initial_egfr_01ug",
"label": "Initial EGFR 01UG",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.initial_egfr_01ug",
"description": "Initial level of EGFR 01UG. Maps to SBML symbol `EGFR_01UG`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "cbl_ubiquitin_ligase",
"label": "Cbl ubiquitin ligase",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.cbl_ubiquitin_ligase",
"description": "Cbl ubiquitin ligase. Maps to SBML symbol `Cbl` and is emitted in native SBML units."
},
{
"name": "grb2_adapter_protein",
"label": "Grb2 adapter protein",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.grb2_adapter_protein",
"description": "Grb2 adapter protein. Maps to SBML symbol `Grb2` and is emitted in native SBML units."
},
{
"name": "tyrosine_site",
"label": "tyrosine site",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.tyrosine_site",
"description": "tyrosine site. Maps to SBML symbol `Tyr` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"egfr"
],
"title": "Capuani2015 - Binding of Cbl and Gbr2 to EGFR (Multisite Phosphorylation Model - MPM) Lab",
"models": [
{
"path": "owned/models/signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model",
"alias": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model",
"provenance": {
"owned_path": "owned/models/signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model_state"
],
"from": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.state"
},
{
"to": [
"visualisation.signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model_summary"
],
"from": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model_species_labels"
],
"from": "signaling_sbml_capuani2015_binding_of_cbl_and_gbr2_to_egfr_mult_biomd0000000594_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "Clean Biosimulant lab for MAPK/ERK receptor signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
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