Physiome 4c0 - CFTR Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_q_cl_i",
        "label": "Initial Q Cl I",
        "maps_to": "physiology_cellml_cftr_4c0_model.initial_q_cl_i",
        "description": "Initial value for Q Cl I. Maps to source symbol `q_Cl_i`. Units: mole. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mole"
        ]
      },
      {
        "name": "initial_q_cl_o",
        "label": "Initial Q Cl O",
        "maps_to": "physiology_cellml_cftr_4c0_model.initial_q_cl_o",
        "description": "Initial value for Q Cl O. Maps to source symbol `q_Cl_o`. Units: mole. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mole"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_cftr_4c0_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_cftr_4c0_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_cftr_4c0_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_cftr_4c0_model.variable_labels"
      },
      {
        "name": "q_cl_i",
        "label": "Q Cl I",
        "maps_to": "physiology_cellml_cftr_4c0_model.q_cl_i",
        "description": "Q Cl I. Maps to source symbol `q_Cl_i`. Units: mole. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "q_cl_o",
        "label": "Q Cl O",
        "maps_to": "physiology_cellml_cftr_4c0_model.q_cl_o",
        "description": "Q Cl O. Maps to source symbol `q_Cl_o`. Units: mole. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cftr_f",
        "label": "Cftr F",
        "maps_to": "physiology_cellml_cftr_4c0_model.cftr_f",
        "description": "Cftr F. Maps to source symbol `F`. Units: C_per_mol. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cftr_r",
        "label": "Cftr R",
        "maps_to": "physiology_cellml_cftr_4c0_model.cftr_r",
        "description": "Cftr R. Maps to source symbol `R`. Units: J_per_mol_K. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cftr_t",
        "label": "Cftr T",
        "maps_to": "physiology_cellml_cftr_4c0_model.cftr_t",
        "description": "Cftr T. Maps to source symbol `T`. Units: kelvin. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "model_variable_r_1",
        "label": "Model Variable R 1 (source R_1)",
        "maps_to": "physiology_cellml_cftr_4c0_model.model_variable_r_1",
        "description": "Model Variable R 1 (source R_1). Maps to source symbol `R_1`. Units: J_per_mol. Naming evidence: source symbol is too ambiguous for a stronger public label."
      }
    ]
  },
  "title": "Physiome 4c0 - CFTR Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_cftr_4c0_model",
      "alias": "physiology_cellml_cftr_4c0_model",
      "parameters": {
        "model_path": "data/CFTR.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_cftr_4c0_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_cftr_4c0_model_state"
      ],
      "from": "physiology_cellml_cftr_4c0_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_cftr_4c0_model_summary"
      ],
      "from": "physiology_cellml_cftr_4c0_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_cftr_4c0_model_trajectory"
      ],
      "from": "physiology_cellml_cftr_4c0_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_cftr_4c0_model_variable_labels"
      ],
      "from": "physiology_cellml_cftr_4c0_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for CFTR. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}