About lab
This a model from the article: Prediction of photoperiodic regulators from quantitative gene circuit models. Salazar JD, Saithong T, Brown PE, Foreman J, Locke JC, Halliday KJ, Carré IA, Rand DA, Mill.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagesalazar2009-photoperiodicregulation-lab
Created2026-05-17
Updated2026-05-17
generegulationsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "light_amplitude",
"label": "Light Amplitude",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.light_amplitude",
"description": "Source parameter exposed because its SBML label indicates a boundary, stimulus, dose, ligand, protocol, substrate, or environmental control. Maps to SBML symbol `lightAmplitude`."
},
{
"name": "light_offset",
"label": "Light Offset",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.light_offset",
"description": "Source parameter exposed because its SBML label indicates a boundary, stimulus, dose, ligand, protocol, substrate, or environmental control. Maps to SBML symbol `lightOffset`."
},
{
"name": "twilight_period",
"label": "Twilight Period",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.twilight_period",
"description": "Source parameter exposed because its SBML label indicates a boundary, stimulus, dose, ligand, protocol, substrate, or environmental control. Maps to SBML symbol `twilightPeriod`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.species_labels"
},
{
"name": "c_tc",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.c_tc"
},
{
"name": "c_xc",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.c_xc"
},
{
"name": "c_pn",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.c_pn"
},
{
"name": "c_lm",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.c_lm"
},
{
"name": "c_tm",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.c_tm"
},
{
"name": "c_xn",
"maps_to": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.c_xn"
}
]
},
"tags": [
"generegulation",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Salazar2009 Photoperiodicregulation Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model",
"alias": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model_state"
],
"from": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model_summary"
],
"from": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model_species_labels"
],
"from": "systemsbiology_sbml_salazar2009_photoperiodicregulation_model1005050000_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "This a model from the article: Prediction of photoperiodic regulators from quantitative gene circuit models. Salazar JD, Saithong T, Brown PE, Foreman J, Locke JC, Halliday KJ, Carré IA, Rand DA, Mill.",
"schema_version": "2.0"
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