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Kyrtsos2011 A Systems Biology Model For Alzheimer S Disease Lab

About lab

Kyrtsos2011 - A systems biology model forAlzheimer's disease (Cholesterol in AD) Encoded non-curated model. It can be used to explore systemsbiology kyrtsos2011 a systems biology for dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

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Completed0
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Metadata

Packagekyrtsos2011-a-systems-biology-model-for-alzheimer-s-disease-lab
Created2026-05-17
Updated2026-05-17
neurosciencesystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_tca",
        "label": "Initial Model State Tca",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.initial_model_state_tca",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `TCA`."
      },
      {
        "name": "initial_cholesterol_a",
        "label": "Initial Cholesterol A",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.initial_cholesterol_a",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Cholesterol_A`."
      },
      {
        "name": "initial_apo_e_a",
        "label": "Initial Apo E A",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.initial_apo_e_a",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ApoE_A`."
      },
      {
        "name": "initial_cholesterol_n",
        "label": "Initial Cholesterol N",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.initial_cholesterol_n",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Cholesterol_N`."
      },
      {
        "name": "initial_s_app",
        "label": "Initial S App",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.initial_s_app",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `sAPP`."
      },
      {
        "name": "initial_gamma_secretase",
        "label": "Initial Gamma Secretase",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.initial_gamma_secretase",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `gamma_secretase`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.species_labels"
      },
      {
        "name": "tca",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.tca"
      },
      {
        "name": "cholesterol_a",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.cholesterol_a"
      },
      {
        "name": "apo_e_a",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.apo_e_a"
      },
      {
        "name": "cholesterol_n",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.cholesterol_n"
      },
      {
        "name": "s_app",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.s_app"
      },
      {
        "name": "gamma_secretase",
        "maps_to": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.gamma_secretase"
      }
    ]
  },
  "tags": [
    "neuroscience",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Kyrtsos2011 A Systems Biology Model For Alzheimer S Disease Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model",
      "alias": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model_state"
      ],
      "from": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model_summary"
      ],
      "from": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model_species_labels"
      ],
      "from": "systemsbiology_sbml_kyrtsos2011_a_systems_biology_model_for_alzheime_model1504240000_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Kyrtsos2011 - A systems biology model forAlzheimer's disease (Cholesterol in AD) Encoded non-curated model. It can be used to explore systemsbiology kyrtsos2011 a systems biology for dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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