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Conant2007_WGD_glycolysis_2A3AB Lab

About lab

Curated microbiology lab for Conant2007_WGD_glycolysis_2A3AB. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.

Runtime

Duration10
Comms Step0.01

Runs

Total0
Completed0
Failed0

Metadata

Packageconant2007-wgd-glycolysis-2a3ab-lab
Created2026-05-15
Updated2026-05-15
microbiologysbmlbiomodels_ebifaithfultelluriumvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "external_glucose",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.external_glucose"
      },
      {
        "name": "fructose_26_bisphosphate_pool",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.fructose_26_bisphosphate_pool"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.state"
      },
      {
        "name": "summary",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.species_labels"
      },
      {
        "name": "intracellular_glucose",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.intracellular_glucose"
      },
      {
        "name": "atp",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.atp"
      },
      {
        "name": "glucose_6_phosphate",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.glucose_6_phosphate"
      },
      {
        "name": "adp",
        "maps_to": "conant2007_wgd_glycolysis_2a3ab.adp"
      }
    ]
  },
  "title": "Conant2007_WGD_glycolysis_2A3AB Lab",
  "models": [
    {
      "path": "owned/models/conant2007_wgd_glycolysis_2a3ab",
      "alias": "conant2007_wgd_glycolysis_2a3ab",
      "provenance": {
        "owned_path": "owned/models/conant2007_wgd_glycolysis_2a3ab"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.conant2007_wgd_glycolysis_2a3ab_state"
      ],
      "from": "conant2007_wgd_glycolysis_2a3ab.state"
    },
    {
      "to": [
        "visualisation.conant2007_wgd_glycolysis_2a3ab_summary"
      ],
      "from": "conant2007_wgd_glycolysis_2a3ab.summary"
    },
    {
      "to": [
        "visualisation.conant2007_wgd_glycolysis_2a3ab_species_labels"
      ],
      "from": "conant2007_wgd_glycolysis_2a3ab.species_labels"
    },
    {
      "to": [
        "visualisation.conant2007_wgd_glycolysis_2a3ab_intracellular_glucose"
      ],
      "from": "conant2007_wgd_glycolysis_2a3ab.intracellular_glucose"
    },
    {
      "to": [
        "visualisation.conant2007_wgd_glycolysis_2a3ab_atp"
      ],
      "from": "conant2007_wgd_glycolysis_2a3ab.atp"
    },
    {
      "to": [
        "visualisation.conant2007_wgd_glycolysis_2a3ab_glucose_6_phosphate"
      ],
      "from": "conant2007_wgd_glycolysis_2a3ab.glucose_6_phosphate"
    },
    {
      "to": [
        "visualisation.conant2007_wgd_glycolysis_2a3ab_adp"
      ],
      "from": "conant2007_wgd_glycolysis_2a3ab.adp"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Curated microbiology lab for Conant2007_WGD_glycolysis_2A3AB. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.",
  "schema_version": "2.0"
}

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