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Grunwald2008 Duchenne Gene Regulation Lab

About lab

Duchenne muscular dystrophy gene-regulatory network. Gene Regulation Grunwald2008Gene Regulation Of The Duchenne Mus Model1403120000Model models core biological dynamics as a OTHER simulation curated from biomodels_ebi (biomodels_ebi:MODEL1403120000), focused on. When you run it, you can track state over time and compare response patterns across parameter settings.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagegrunwald2008-duchenne-gene-regulation-lab
Created2026-05-15
Updated2026-05-15
generegulationsbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "calcium_pool",
        "maps_to": "grunwald2008_duchenne_gene_regulation.calcium_pool"
      },
      {
        "name": "nfatc",
        "maps_to": "grunwald2008_duchenne_gene_regulation.nfatc"
      },
      {
        "name": "anf_expression",
        "maps_to": "grunwald2008_duchenne_gene_regulation.anf_expression"
      },
      {
        "name": "alpha_actin",
        "maps_to": "grunwald2008_duchenne_gene_regulation.alpha_actin"
      },
      {
        "name": "state",
        "maps_to": "grunwald2008_duchenne_gene_regulation.state"
      },
      {
        "name": "summary",
        "maps_to": "grunwald2008_duchenne_gene_regulation.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "grunwald2008_duchenne_gene_regulation.species_labels"
      }
    ]
  },
  "title": "Grunwald2008 Duchenne Gene Regulation Lab",
  "models": [
    {
      "path": "owned/models/grunwald2008_duchenne_gene_regulation",
      "alias": "grunwald2008_duchenne_gene_regulation",
      "parameters": {
        "model_path": "data/MODEL1403120000.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/grunwald2008_duchenne_gene_regulation"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.grunwald2008_duchenne_gene_regulation_calcium_pool"
      ],
      "from": "grunwald2008_duchenne_gene_regulation.calcium_pool"
    },
    {
      "to": [
        "visualisation.grunwald2008_duchenne_gene_regulation_nfatc"
      ],
      "from": "grunwald2008_duchenne_gene_regulation.nfatc"
    },
    {
      "to": [
        "visualisation.grunwald2008_duchenne_gene_regulation_anf_expression"
      ],
      "from": "grunwald2008_duchenne_gene_regulation.anf_expression"
    },
    {
      "to": [
        "visualisation.grunwald2008_duchenne_gene_regulation_alpha_actin"
      ],
      "from": "grunwald2008_duchenne_gene_regulation.alpha_actin"
    },
    {
      "to": [
        "visualisation.grunwald2008_duchenne_gene_regulation_state"
      ],
      "from": "grunwald2008_duchenne_gene_regulation.state"
    },
    {
      "to": [
        "visualisation.grunwald2008_duchenne_gene_regulation_summary"
      ],
      "from": "grunwald2008_duchenne_gene_regulation.summary"
    },
    {
      "to": [
        "visualisation.grunwald2008_duchenne_gene_regulation_species_labels"
      ],
      "from": "grunwald2008_duchenne_gene_regulation.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Duchenne muscular dystrophy gene-regulatory network. Gene Regulation Grunwald2008Gene Regulation Of The Duchenne Mus Model1403120000Model models core biological dynamics as a OTHER simulation curated from biomodels_ebi (biomodels_ebi:MODEL1403120000), focused on. When you run it, you can track state over time and compare response patterns across parameter settings.",
  "schema_version": "2.0"
}

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