Pivonka2008 - Zimak Smith Gardiner Dunstan Sims Martin Mundy Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_bv",
        "label": "Initial Model State Bv (source BV)",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.initial_model_state_bv",
        "description": "Initial value for Model State Bv (source BV). Maps to source symbol `BV`. Units: dimensionless. Naming evidence: source symbol is dimensionless but lacks enough evidence for a biological label.",
        "accepted_units": [
          "dimensionless"
        ]
      },
      {
        "name": "initial_ob_a",
        "label": "Initial Ob A",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.initial_ob_a",
        "description": "Initial value for Ob A. Maps to source symbol `OB_a`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "dimensionless"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.variable_labels"
      },
      {
        "name": "beta_pth",
        "label": "Beta Pth",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.beta_pth",
        "description": "Beta Pth. Maps to source symbol `beta_PTH`. Units: flux. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "deg_pth",
        "label": "Deg Pth",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.deg_pth",
        "description": "Deg Pth. Maps to source symbol `Deg_PTH`. Units: first_order_rate_constant. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "kd_pth_activate",
        "label": "Kd Pth Activate",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.kd_pth_activate",
        "description": "Kd Pth Activate. Maps to source symbol `KD_PTH_activate`. Units: pM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "kd_pth_repress",
        "label": "Kd Pth Repress",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.kd_pth_repress",
        "description": "Kd Pth Repress. Maps to source symbol `KD_PTH_repress`. Units: pM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "p_pth_d",
        "label": "P Pth D",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.p_pth_d",
        "description": "P Pth D. Maps to source symbol `P_PTH_d`. Units: flux. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "pi_pth_act",
        "label": "Pi Pth Act",
        "maps_to": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.pi_pth_act",
        "description": "Pi Pth Act. Maps to source symbol `pi_PTH_act`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Pivonka2008 - Zimak Smith Gardiner Dunstan Sims Martin Mundy Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model",
      "alias": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model",
      "parameters": {
        "model_path": "data/pivonka_2008.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model_state"
      ],
      "from": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model_summary"
      ],
      "from": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model_trajectory"
      ],
      "from": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model_variable_labels"
      ],
      "from": "physiology_cellml_pivonka_zimak_smith_gardiner_dunstan_sims_martin_pivonkazimaksmithgardinerdunstansimsmartinmundy2008_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Pivonka, Zimak, Smith, Gardiner, Dunstan, Sims, Martin and Mundy, 2008. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}