Bagci2008 - Nitric Oxide Apoptosis Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_cc_ox",
        "label": "Initial Cc Ox",
        "maps_to": "physiology_cellml_bagci_2008_363_model.initial_cc_ox",
        "description": "Initial value for Cc Ox. Maps to source symbol `CcOX`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "micromolar"
        ]
      },
      {
        "name": "initial_concentration_o_2m",
        "label": "Initial Concentration O 2m (source O_2m)",
        "maps_to": "physiology_cellml_bagci_2008_363_model.initial_concentration_o_2m",
        "description": "Initial value for Concentration O 2m (source O_2m). Maps to source symbol `O_2m`. Units: micromolar. Naming evidence: amount concentration units identify a concentration state.",
        "accepted_units": [
          "micromolar"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_bagci_2008_363_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_bagci_2008_363_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_bagci_2008_363_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_bagci_2008_363_model.variable_labels"
      },
      {
        "name": "oxygen",
        "label": "Oxygen",
        "maps_to": "physiology_cellml_bagci_2008_363_model.oxygen",
        "description": "Oxygen. Maps to source symbol `O_2`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cc_ox",
        "label": "Cc Ox",
        "maps_to": "physiology_cellml_bagci_2008_363_model.cc_ox",
        "description": "Cc Ox. Maps to source symbol `CcOX`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "concentration_o_2m",
        "label": "Concentration O 2m (source O_2m)",
        "maps_to": "physiology_cellml_bagci_2008_363_model.concentration_o_2m",
        "description": "Concentration O 2m (source O_2m). Maps to source symbol `O_2m`. Units: micromolar. Naming evidence: amount concentration units identify a concentration state."
      },
      {
        "name": "fe_ln",
        "label": "Fe Ln",
        "maps_to": "physiology_cellml_bagci_2008_363_model.fe_ln",
        "description": "Fe Ln. Maps to source symbol `FeLn`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "gsh",
        "label": "Gsh",
        "maps_to": "physiology_cellml_bagci_2008_363_model.gsh",
        "description": "Gsh. Maps to source symbol `GSH`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "gsno",
        "label": "Gsno",
        "maps_to": "physiology_cellml_bagci_2008_363_model.gsno",
        "description": "Gsno. Maps to source symbol `GSNO`. Units: micromolar. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Bagci2008 - Nitric Oxide Apoptosis Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_bagci_2008_363_model",
      "parameters": {
        "model_path": "data/bagci_2008a.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_bagci_2008_363_model_state"
      ],
      "from": "physiology_cellml_bagci_2008_363_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bagci_2008_363_model_summary"
      ],
      "from": "physiology_cellml_bagci_2008_363_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bagci_2008_363_model_trajectory"
      ],
      "from": "physiology_cellml_bagci_2008_363_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_bagci_2008_363_model_variable_labels"
      ],
      "from": "physiology_cellml_bagci_2008_363_model.variable_labels"
    }
  ],
  "package": "bagci2008-nitric-oxide-apoptosis",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Bagci 2008. Public controls and outputs are mapped to real source symbols for respiratory physiology.",
  "schema_version": "2.0"
}