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Pritchard2014 - plant-microbe interaction Lab

About lab

Curated microbiology lab for Pritchard2014 - plant-microbe interaction. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.

Runtime

Duration10
Comms Step0.01

Runs

Total0
Completed0
Failed0

Metadata

Packagepritchard2014-plant-microbe-interaction-lab
Created2026-05-15
Updated2026-05-15
microbiologysbmlbiomodels_ebifaithfultelluriumvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_pamp_signal",
        "maps_to": "pritchard2014_plant_microbe_interaction.initial_pamp_signal"
      },
      {
        "name": "initial_pathogen_load",
        "maps_to": "pritchard2014_plant_microbe_interaction.initial_pathogen_load"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "pritchard2014_plant_microbe_interaction.state"
      },
      {
        "name": "summary",
        "maps_to": "pritchard2014_plant_microbe_interaction.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "pritchard2014_plant_microbe_interaction.species_labels"
      },
      {
        "name": "pamp_signal",
        "maps_to": "pritchard2014_plant_microbe_interaction.pamp_signal"
      },
      {
        "name": "receptor_state",
        "maps_to": "pritchard2014_plant_microbe_interaction.receptor_state"
      },
      {
        "name": "callose",
        "maps_to": "pritchard2014_plant_microbe_interaction.callose"
      },
      {
        "name": "pathogen_load",
        "maps_to": "pritchard2014_plant_microbe_interaction.pathogen_load"
      }
    ]
  },
  "title": "Pritchard2014 - plant-microbe interaction Lab",
  "models": [
    {
      "path": "owned/models/pritchard2014_plant_microbe_interaction",
      "alias": "pritchard2014_plant_microbe_interaction",
      "provenance": {
        "owned_path": "owned/models/pritchard2014_plant_microbe_interaction"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.pritchard2014_plant_microbe_interaction_state"
      ],
      "from": "pritchard2014_plant_microbe_interaction.state"
    },
    {
      "to": [
        "visualisation.pritchard2014_plant_microbe_interaction_summary"
      ],
      "from": "pritchard2014_plant_microbe_interaction.summary"
    },
    {
      "to": [
        "visualisation.pritchard2014_plant_microbe_interaction_species_labels"
      ],
      "from": "pritchard2014_plant_microbe_interaction.species_labels"
    },
    {
      "to": [
        "visualisation.pritchard2014_plant_microbe_interaction_pamp_signal"
      ],
      "from": "pritchard2014_plant_microbe_interaction.pamp_signal"
    },
    {
      "to": [
        "visualisation.pritchard2014_plant_microbe_interaction_receptor_state"
      ],
      "from": "pritchard2014_plant_microbe_interaction.receptor_state"
    },
    {
      "to": [
        "visualisation.pritchard2014_plant_microbe_interaction_callose"
      ],
      "from": "pritchard2014_plant_microbe_interaction.callose"
    },
    {
      "to": [
        "visualisation.pritchard2014_plant_microbe_interaction_pathogen_load"
      ],
      "from": "pritchard2014_plant_microbe_interaction.pathogen_load"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Curated microbiology lab for Pritchard2014 - plant-microbe interaction. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.",
  "schema_version": "2.0"
}

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