Tomida2003 - Nfat Functions Working Memory Signals Decoding Oscillation Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_nfatp_cyt",
        "label": "Initial Nfatp Cyt",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.initial_nfatp_cyt",
        "description": "Initial value for Nfatp Cyt. Maps to source symbol `NFATP_cyt`. Units: molecule. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "molecule"
        ]
      },
      {
        "name": "initial_nfat_cyt",
        "label": "Initial Nfat Cyt",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.initial_nfat_cyt",
        "description": "Initial value for Nfat Cyt. Maps to source symbol `NFAT_cyt`. Units: molecule. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "molecule"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.variable_labels"
      },
      {
        "name": "nfatp_cyt",
        "label": "Nfatp Cyt",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.nfatp_cyt",
        "description": "Nfatp Cyt. Maps to source symbol `NFATP_cyt`. Units: molecule. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "percentage_nfatp_cyt",
        "label": "Percentage Nfatp Cyt",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.percentage_nfatp_cyt",
        "description": "Percentage Nfatp Cyt. Maps to source symbol `percentage_NFATP_cyt`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "nfat_cyt",
        "label": "Nfat Cyt",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.nfat_cyt",
        "description": "Nfat Cyt. Maps to source symbol `NFAT_cyt`. Units: molecule. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "nfat_nuc",
        "label": "Nfat Nuc",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.nfat_nuc",
        "description": "Nfat Nuc. Maps to source symbol `NFAT_nuc`. Units: molecule. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "jdephosphorylation",
        "label": "Jdephosphorylation",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.jdephosphorylation",
        "description": "Jdephosphorylation. Maps to source symbol `Jdephosphorylation`. Units: molecules_per_minute. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "jexport",
        "label": "Jexport",
        "maps_to": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.jexport",
        "description": "Jexport. Maps to source symbol `Jexport`. Units: molecules_per_minute. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Tomida2003 - Nfat Functions Working Memory Signals Decoding Oscillation Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model",
      "alias": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model",
      "parameters": {
        "model_path": "data/tomida_hirose_takizawa_shibasaki_iino_2003.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model_state"
      ],
      "from": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model_summary"
      ],
      "from": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model_trajectory"
      ],
      "from": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model_variable_labels"
      ],
      "from": "physiology_cellml_tomida_hirose_takizawa_shibasaki_iino_2003_tomidahirosetakizawashibasakiiino2003_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Tomida, Hirose, Takizawa, Shibasaki, Iino, 2003. Public controls and outputs are mapped to real source symbols for oscillatory physiology.",
  "schema_version": "2.0"
}