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Abu Soud1999 Homoarginine Lab

About lab

This model is taken from the <a href = 'http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=10493814&query_hl=10&itool=pubmed_docsum. It can be used to explore systemsbiology abu soud1999 homoarginine model9087988095 dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packageabu-soud1999-homoarginine-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_homoarginine",
        "label": "Initial Homoarginine",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.initial_homoarginine",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Homoarginine`."
      },
      {
        "name": "initial_im_minus_nnos",
        "label": "Initial Im Minus Nnos",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.initial_im_minus_nnos",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Im_minus_nNOS`."
      },
      {
        "name": "initial_nnos_minus_homoarginine",
        "label": "Initial Nnos Minus Homoarginine",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.initial_nnos_minus_homoarginine",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `nNOS_minus_Homoarginine`."
      },
      {
        "name": "initial_imidazole",
        "label": "Initial Imidazole",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.initial_imidazole",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Imidazole`."
      },
      {
        "name": "initial_im_minus_nnos_minus_homoarginine",
        "label": "Initial Im Minus Nnos Minus Homoarginine",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.initial_im_minus_nnos_minus_homoarginine",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Im_minus_nNOS_minus_Homoarginine`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.species_labels"
      },
      {
        "name": "homoarginine",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.homoarginine"
      },
      {
        "name": "im_minus_nnos",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.im_minus_nnos"
      },
      {
        "name": "nnos_minus_homoarginine",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.nnos_minus_homoarginine"
      },
      {
        "name": "imidazole",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.imidazole"
      },
      {
        "name": "im_minus_nnos_minus_homoarginine",
        "maps_to": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.im_minus_nnos_minus_homoarginine"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Abu Soud1999 Homoarginine Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model",
      "alias": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model_state"
      ],
      "from": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model_summary"
      ],
      "from": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model_species_labels"
      ],
      "from": "systemsbiology_sbml_abu_soud1999_homoarginine_model9087988095_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model is taken from the <a href = 'http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=10493814&query_hl=10&itool=pubmed_docsum. It can be used to explore systemsbiology abu soud1999 homoarginine model9087988095 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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