BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Goldbeter1990 Calciumspike Cicr Lab

About lab

The model reproduces the time profile of cytosolic and intracellular calcium as depicted in the upper panel of Fig 2 in the paper. The model was successfully tested on MathSBML and Jarnac.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagegoldbeter1990-calciumspike-cicr-lab
Created2026-05-17
Updated2026-05-17
generegulationphysiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_y",
        "label": "Initial Model State Y",
        "maps_to": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.initial_model_state_y",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Y`."
      },
      {
        "name": "initial_model_state_z",
        "label": "Initial Model State Z",
        "maps_to": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.initial_model_state_z",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Z`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.species_labels"
      },
      {
        "name": "model_state_y",
        "maps_to": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.model_state_y"
      },
      {
        "name": "model_state_z",
        "maps_to": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.model_state_z"
      }
    ]
  },
  "tags": [
    "generegulation",
    "physiology",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Goldbeter1990 Calciumspike Cicr Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model",
      "alias": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model_state"
      ],
      "from": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model_summary"
      ],
      "from": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model_species_labels"
      ],
      "from": "systemsbiology_sbml_goldbeter1990_calciumspike_cicr_biomd0000000098_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "The model reproduces the time profile of cytosolic and intracellular calcium as depicted in the upper panel of Fig 2 in the paper. The model was successfully tested on MathSBML and Jarnac.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.