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BIOMD0000000526 Variant Kallenberger2014 Cd95l Induced Apoptosis Initiated By Caspase 8 Wild Type H 2 Lab

About lab

Kallenberger2014 - CD95L induced apoptosis initiated by caspase-8, wild-type HeLa cells (cis/trans-cis/trans variant) The paper describes a new approach that combines single cell and population data i. It can be used to explore systemsbiology kallenberger2014 cd95l induced apoptosis initiat dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagebiomd0000000526-kallenberger2014-cd95l-induced-apoptosis-initiat
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_pr_er_m_gfp",
        "label": "Initial Pr Er M Gfp",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.initial_pr_er_m_gfp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PrER_mGFP`."
      },
      {
        "name": "initial_pr_nes_m_cherry",
        "label": "Initial Pr Nes M Cherry",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.initial_pr_nes_m_cherry",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PrNES_mCherry`."
      },
      {
        "name": "initial_p55free",
        "label": "Initial P55free",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.initial_p55free",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `p55free`."
      },
      {
        "name": "initial_t_bid",
        "label": "Initial T Bid",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.initial_t_bid",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `tBid`."
      },
      {
        "name": "initial_model_state_p43",
        "label": "Initial Model State P43",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.initial_model_state_p43",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `p43`."
      },
      {
        "name": "initial_model_state_p30",
        "label": "Initial Model State P30",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.initial_model_state_p30",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `p30`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.species_labels"
      },
      {
        "name": "pr_er_m_gfp",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.pr_er_m_gfp"
      },
      {
        "name": "pr_nes_m_cherry",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.pr_nes_m_cherry"
      },
      {
        "name": "p55free",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.p55free"
      },
      {
        "name": "t_bid",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.t_bid"
      },
      {
        "name": "p43",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.p43"
      },
      {
        "name": "p30",
        "maps_to": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.p30"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "BIOMD0000000526 Variant Kallenberger2014 Cd95l Induced Apoptosis Initiated By Caspase 8 Wild Type H 2 Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model",
      "alias": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model_state"
      ],
      "from": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model_summary"
      ],
      "from": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model_species_labels"
      ],
      "from": "systemsbiology_sbml_kallenberger2014_cd95l_induced_apoptosis_initiat_biomd0000000526_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Kallenberger2014 - CD95L induced apoptosis initiated by caspase-8, wild-type HeLa cells (cis/trans-cis/trans variant) The paper describes a new approach that combines single cell and population data i. It can be used to explore systemsbiology kallenberger2014 cd95l induced apoptosis initiat dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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