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Novak1998-Model scenarios for evolution of the eukaryotic cell cycle. Lab

About lab

Single-model lab wrapper for Novak1998-Model scenarios for evolution of the eukaryotic cell cycle.. Progress through the division cycle of present day eukaryotic cells is controlled by a complex network consisting of (i) cyclin-dependent kinases (CDKs) and their associated cyclins, (ii) kinases and. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagenovak1998-model-scenarios-for-evolution-of-the-eukaryotic-cell-c
Created2026-05-15
Updated2026-05-15
cellcyclesbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "cyclin_dependent_kinase_activity",
        "label": "Cyclin-dependent kinase activity",
        "maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.cyclin_dependent_kinase_activity",
        "description": "Tracks Cyclin-dependent kinase activity in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.cyclin_dependent_kinase_activity`."
      },
      {
        "name": "apc_c_c",
        "label": "APC/C/C",
        "maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.apc_c_c",
        "description": "Tracks APC/C/C in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.apc_c_c`."
      },
      {
        "name": "size",
        "label": "Size",
        "maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.size",
        "description": "Tracks Size in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.size`."
      },
      {
        "name": "total_active_regulatory_state",
        "label": "Total active regulatory state",
        "maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.total_active_regulatory_state",
        "description": "Tracks Total active regulatory state in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.total_active_regulatory_state`."
      },
      {
        "name": "active_regulatory_state",
        "label": "Active regulatory state",
        "maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.active_regulatory_state",
        "description": "Tracks Active regulatory state in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.active_regulatory_state`."
      },
      {
        "name": "cyclin_dependent_kinase_inhibitor",
        "label": "Cyclin-dependent kinase inhibitor",
        "maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.cyclin_dependent_kinase_inhibitor",
        "description": "Tracks Cyclin-dependent kinase inhibitor in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.cyclin_dependent_kinase_inhibitor`."
      },
      {
        "name": "trimer_complex",
        "label": "Trimer complex",
        "maps_to": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.trimer_complex",
        "description": "Tracks Trimer complex in the lab model via `cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.trimer_complex`."
      }
    ]
  },
  "title": "Novak1998-Model scenarios for evolution of the eukaryotic cell cycle. Lab",
  "models": [
    {
      "path": "owned/models/cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model",
      "alias": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model",
      "provenance": {
        "owned_path": "owned/models/cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model_state"
      ],
      "from": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.state"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model_summary"
      ],
      "from": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.summary"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model_species_labels"
      ],
      "from": "cellcycle_sbml_novak1998_model_scenarios_for_evolution_of_the_e_model2005040001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Single-model lab wrapper for Novak1998-Model scenarios for evolution of the eukaryotic cell cycle.. Progress through the division cycle of present day eukaryotic cells is controlled by a complex network consisting of (i) cyclin-dependent kinases (CDKs) and their associated cyclins, (ii) kinases and. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.",
  "schema_version": "2.0"
}

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