About lab
Clean Biosimulant lab for JAK/STAT cytokine signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageadlung2021-cell-to-cell-variability-in-jak2-stat5-pathway-lab
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebijak-statvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_epo_receptor_jak2_complex",
"label": "Initial EPO receptor-JAK2 complex",
"maps_to": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.initial_epo_receptor_jak2_complex",
"description": "Initial level of EPO receptor-JAK2 complex. Maps to SBML symbol `EpoRJAK2`; exposed as a traceable initial-condition perturbation."
}
],
"outputs": [
{
"name": "stat5",
"label": "STAT5",
"maps_to": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.stat5",
"description": "STAT5. Maps to SBML symbol `STAT5` and is emitted in native SBML units."
},
{
"name": "phosphorylated_stat5",
"label": "phosphorylated STAT5",
"maps_to": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.phosphorylated_stat5",
"description": "phosphorylated STAT5. Maps to SBML symbol `pSTAT5` and is emitted in native SBML units."
},
{
"name": "nuclear_phosphorylated_stat5",
"label": "nuclear phosphorylated STAT5",
"maps_to": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.nuclear_phosphorylated_stat5",
"description": "nuclear phosphorylated STAT5. Maps to SBML symbol `npSTAT5` and is emitted in native SBML units."
},
{
"name": "state",
"label": "Observable state",
"maps_to": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.species_labels"
}
]
},
"tags": [
"signaling",
"systems",
"systems-biology",
"sbml",
"faithful",
"biomodels_ebi",
"jak-stat"
],
"title": "Adlung2021 - Cell-to-cell variability in JAK2/STAT5 pathway Lab",
"models": [
{
"path": "owned/models/signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model",
"alias": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model",
"provenance": {
"owned_path": "owned/models/signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model_state"
],
"from": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.state"
},
{
"to": [
"visualisation.signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model_summary"
],
"from": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.summary"
},
{
"to": [
"visualisation.signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model_species_labels"
],
"from": "signaling_sbml_adlung2021_cell_to_cell_variability_in_jak2_stat_biomd0000001077_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "Clean Biosimulant lab for JAK/STAT cytokine signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
"schema_version": "2.0"
}Sign in to start your own run. Public-lab history stays visible here.
Select a run from History to view its results.