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Heinze1998 - Mathematical Luteinizing Hormone Release Ovine Pituitary Lab

About lab

Source-faithful physiology lab for Heinze, Keener, Midgley, 1998. Public controls and outputs are mapped to real source symbols for signalling physiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packageheinze1998-mathematical-luteinizing-hormone-release-ovine-pituit
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_bound_gonadotropin_releasing_hormone_receptor",
        "label": "Initial Bound Gonadotropin Releasing Hormone Receptor",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.initial_bound_gonadotropin_releasing_hormone_receptor",
        "description": "Initial value for Bound Gonadotropin Releasing Hormone Receptor. Maps to source symbol `B`. Units: dimensionless. Naming evidence: source metadata names `B` as `bound gonadotropin-releasing hormone receptor`.",
        "accepted_units": [
          "dimensionless"
        ]
      },
      {
        "name": "initial_desensitized_gonadotropin_releasing_hormone_receptor",
        "label": "Initial Desensitized Gonadotropin Releasing Hormone Receptor",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.initial_desensitized_gonadotropin_releasing_hormone_receptor",
        "description": "Initial value for Desensitized Gonadotropin Releasing Hormone Receptor. Maps to source symbol `D`. Units: dimensionless. Naming evidence: source metadata names `D` as `desensitized gonadotropin-releasing hormone receptor`.",
        "accepted_units": [
          "dimensionless"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.variable_labels"
      },
      {
        "name": "bound_gonadotropin_releasing_hormone_receptor",
        "label": "Bound Gonadotropin Releasing Hormone Receptor",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.bound_gonadotropin_releasing_hormone_receptor",
        "description": "Bound Gonadotropin Releasing Hormone Receptor. Maps to source symbol `B`. Units: dimensionless. Naming evidence: source metadata names `B` as `bound gonadotropin-releasing hormone receptor`."
      },
      {
        "name": "desensitized_gonadotropin_releasing_hormone_receptor",
        "label": "Desensitized Gonadotropin Releasing Hormone Receptor",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.desensitized_gonadotropin_releasing_hormone_receptor",
        "description": "Desensitized Gonadotropin Releasing Hormone Receptor. Maps to source symbol `D`. Units: dimensionless. Naming evidence: source metadata names `D` as `desensitized gonadotropin-releasing hormone receptor`."
      },
      {
        "name": "free_gonadotropin_releasing_hormone_receptor",
        "label": "Free Gonadotropin Releasing Hormone Receptor",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.free_gonadotropin_releasing_hormone_receptor",
        "description": "Free Gonadotropin Releasing Hormone Receptor. Maps to source symbol `F`. Units: dimensionless. Naming evidence: source metadata names `F` as `free gonadotropin-releasing hormone receptor`."
      },
      {
        "name": "releasable_luteinizing_hormone",
        "label": "Releasable Luteinizing Hormone",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.releasable_luteinizing_hormone",
        "description": "Releasable Luteinizing Hormone. Maps to source symbol `R`. Units: dimensionless. Naming evidence: source metadata names `R` as `releasable luteinizing hormone`."
      },
      {
        "name": "total_cumulative_amount_of_extracellular_luteinizing_hormone_sec",
        "label": "Total Cumulative Amount Of Extracellular Luteinizing Hormone Sec",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.total_cumulative_amount_of_extracellular_luteinizing_hormone_sec",
        "description": "Total Cumulative Amount Of Extracellular Luteinizing Hormone Sec. Maps to source symbol `C`. Units: dimensionless. Naming evidence: source metadata names `C` as `total (cumulative) amount of extracellular luteinizing hormone secreted`."
      },
      {
        "name": "gonadotropin_releasing_hormone",
        "label": "Gonadotropin Releasing Hormone",
        "maps_to": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.gonadotropin_releasing_hormone",
        "description": "Gonadotropin Releasing Hormone. Maps to source symbol `GnRH`. Units: nanomolar. Naming evidence: source metadata names `GnRH` as `gonadotropin-releasing hormone`."
      }
    ]
  },
  "title": "Heinze1998 - Mathematical Luteinizing Hormone Release Ovine Pituitary Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model",
      "alias": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model",
      "parameters": {
        "model_path": "data/heinze_keener_midgley_1998_a.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model_state"
      ],
      "from": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model_summary"
      ],
      "from": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model_trajectory"
      ],
      "from": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model_variable_labels"
      ],
      "from": "physiology_cellml_heinze_keener_midgley_1998_heinzekeenermidgley1998_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Heinze, Keener, Midgley, 1998. Public controls and outputs are mapped to real source symbols for signalling physiology.",
  "schema_version": "2.0"
}

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