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Liò2012_Modelling osteomyelitis_Control Model Lab

About lab

Curated microbiology lab for Liò2012_Modelling osteomyelitis_Control Model. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.

Runtime

Duration10
Comms Step0.01

Runs

Total0
Completed0
Failed0

Metadata

Packageli-2012-modelling-osteomyelitis-control-model-lab
Created2026-05-15
Updated2026-05-15
microbiologysbmlbiomodels_ebifaithfultelluriumvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "treatment_start_time",
        "maps_to": "lio2012_osteomyelitis_control.treatment_start_time"
      },
      {
        "name": "initial_bacterial_burden",
        "maps_to": "lio2012_osteomyelitis_control.initial_bacterial_burden"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "lio2012_osteomyelitis_control.state"
      },
      {
        "name": "summary",
        "maps_to": "lio2012_osteomyelitis_control.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "lio2012_osteomyelitis_control.species_labels"
      },
      {
        "name": "bacterial_burden",
        "maps_to": "lio2012_osteomyelitis_control.bacterial_burden"
      },
      {
        "name": "bone_density",
        "maps_to": "lio2012_osteomyelitis_control.bone_density"
      },
      {
        "name": "osteoblasts",
        "maps_to": "lio2012_osteomyelitis_control.osteoblasts"
      },
      {
        "name": "osteoclasts",
        "maps_to": "lio2012_osteomyelitis_control.osteoclasts"
      }
    ]
  },
  "title": "Liò2012_Modelling osteomyelitis_Control Model Lab",
  "models": [
    {
      "path": "owned/models/lio2012_osteomyelitis_control",
      "alias": "lio2012_osteomyelitis_control",
      "provenance": {
        "owned_path": "owned/models/lio2012_osteomyelitis_control"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.lio2012_osteomyelitis_control_state"
      ],
      "from": "lio2012_osteomyelitis_control.state"
    },
    {
      "to": [
        "visualisation.lio2012_osteomyelitis_control_summary"
      ],
      "from": "lio2012_osteomyelitis_control.summary"
    },
    {
      "to": [
        "visualisation.lio2012_osteomyelitis_control_species_labels"
      ],
      "from": "lio2012_osteomyelitis_control.species_labels"
    },
    {
      "to": [
        "visualisation.lio2012_osteomyelitis_control_bacterial_burden"
      ],
      "from": "lio2012_osteomyelitis_control.bacterial_burden"
    },
    {
      "to": [
        "visualisation.lio2012_osteomyelitis_control_bone_density"
      ],
      "from": "lio2012_osteomyelitis_control.bone_density"
    },
    {
      "to": [
        "visualisation.lio2012_osteomyelitis_control_osteoblasts"
      ],
      "from": "lio2012_osteomyelitis_control.osteoblasts"
    },
    {
      "to": [
        "visualisation.lio2012_osteomyelitis_control_osteoclasts"
      ],
      "from": "lio2012_osteomyelitis_control.osteoclasts"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Curated microbiology lab for Liò2012_Modelling osteomyelitis_Control Model. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.",
  "schema_version": "2.0"
}

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