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Benson2008 - Canine Virtual Ventricular Wall Platform Dissecting Lab

About lab

Source-faithful physiology lab for Benson 2008. Public controls and outputs are mapped to real source symbols for electrophysiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packagebenson2008-canine-virtual-ventricular-wall-platform-dissecting-l
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_intracellular_calcium",
        "label": "Initial Intracellular Calcium",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.initial_intracellular_calcium",
        "description": "Initial value for Intracellular Calcium. Maps to source symbol `Ca_i`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mM"
        ]
      },
      {
        "name": "initial_intracellular_sodium",
        "label": "Initial Intracellular Sodium",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.initial_intracellular_sodium",
        "description": "Initial value for Intracellular Sodium. Maps to source symbol `Na_i`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "mM"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.variable_labels"
      },
      {
        "name": "intracellular_calcium",
        "label": "Intracellular Calcium",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.intracellular_calcium",
        "description": "Intracellular Calcium. Maps to source symbol `Ca_i`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "intracellular_sodium",
        "label": "Intracellular Sodium",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.intracellular_sodium",
        "description": "Intracellular Sodium. Maps to source symbol `Na_i`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "intracellular_potassium",
        "label": "Intracellular Potassium",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.intracellular_potassium",
        "description": "Intracellular Potassium. Maps to source symbol `K_i`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "intracellular_chloride",
        "label": "Intracellular Chloride",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.intracellular_chloride",
        "description": "Intracellular Chloride. Maps to source symbol `Cl_i`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "extracellular_calcium",
        "label": "Extracellular Calcium",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.extracellular_calcium",
        "description": "Extracellular Calcium. Maps to source symbol `Ca_o`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "extracellular_sodium",
        "label": "Extracellular Sodium",
        "maps_to": "physiology_cellml_benson_2008_2e3_model.extracellular_sodium",
        "description": "Extracellular Sodium. Maps to source symbol `Na_o`. Units: mM. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Benson2008 - Canine Virtual Ventricular Wall Platform Dissecting Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_benson_2008_2e3_model",
      "alias": "physiology_cellml_benson_2008_2e3_model",
      "parameters": {
        "model_path": "data/benson_endocardial_2008.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_benson_2008_2e3_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_benson_2008_2e3_model_state"
      ],
      "from": "physiology_cellml_benson_2008_2e3_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_benson_2008_2e3_model_summary"
      ],
      "from": "physiology_cellml_benson_2008_2e3_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_benson_2008_2e3_model_trajectory"
      ],
      "from": "physiology_cellml_benson_2008_2e3_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_benson_2008_2e3_model_variable_labels"
      ],
      "from": "physiology_cellml_benson_2008_2e3_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Benson 2008. Public controls and outputs are mapped to real source symbols for electrophysiology.",
  "schema_version": "2.0"
}

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