About lab
Source-faithful physiology lab for Qu, Maclellan, Weiss, 2003. Public controls and outputs are mapped to real source symbols for cell-cycle dynamics.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagequ2003-cell-cycle-lab
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_apc",
"label": "Initial Apc",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.initial_apc",
"description": "Initial value for Apc. Maps to source symbol `APC`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"dimensionless"
]
},
{
"name": "initial_cdc25",
"label": "Initial Cdc25",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.initial_cdc25",
"description": "Initial value for Cdc25. Maps to source symbol `Cdc25`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name.",
"accepted_units": [
"dimensionless"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.variable_labels"
},
{
"name": "apc",
"label": "Apc",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.apc",
"description": "Apc. Maps to source symbol `APC`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "cdc25",
"label": "Cdc25",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.cdc25",
"description": "Cdc25. Maps to source symbol `Cdc25`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "cdc25_2_p",
"label": "Cdc25 2 P",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.cdc25_2_p",
"description": "Cdc25 2 P. Maps to source symbol `Cdc25_2P`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "cdc25_p",
"label": "Cdc25 P",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.cdc25_p",
"description": "Cdc25 P. Maps to source symbol `Cdc25_P`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "cki",
"label": "Cki",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.cki",
"description": "Cki. Maps to source symbol `CKI`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
},
{
"name": "cyclin",
"label": "Cyclin",
"maps_to": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.cyclin",
"description": "Cyclin. Maps to source symbol `cyclin`. Units: dimensionless. Naming evidence: source symbol, component, or units provide a direct public name."
}
]
},
"title": "Qu2003 - Cell Cycle Lab",
"models": [
{
"path": "owned/models/physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model",
"alias": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model",
"parameters": {
"model_path": "data/qu_maclellan_weiss_2003.cellml",
"integration_step": 0.01
},
"provenance": {
"owned_path": "owned/models/physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model_state"
],
"from": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.state"
},
{
"to": [
"visualisation.physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model_summary"
],
"from": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model_trajectory"
],
"from": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model_variable_labels"
],
"from": "physiology_cellml_qu_maclellan_weiss_2003_qumaclellanweiss2003_model.variable_labels"
}
],
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"description": "Source-faithful physiology lab for Qu, Maclellan, Weiss, 2003. Public controls and outputs are mapped to real source symbols for cell-cycle dynamics.",
"schema_version": "2.0"
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