About lab
Morrison1989 - Folate Cycle The model describes the folate cyclekinetics in breast cancer cells. This model is described in the article: Folate cycle kinetics in human breast cancer cells.
Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagemorrison1989-folate-cycle-lab
Created2026-05-16
Updated2026-05-16
biomodels_ebicuratedfaithfulmetabolismoncologyphysiologysbmlsystemsbiologytumor-growthvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_dihydrofolate_free",
"label": "Dihydrofolate free",
"units": "native SBML value",
"default": 0.0012,
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.initial_dihydrofolate_free",
"description": "Initial Dihydrofolate free. Sets the initial value of bundled SBML symbol `FH2f`."
},
{
"name": "initial_tetrahydrofolate",
"label": "Tetrahydrofolate",
"units": "native SBML value",
"default": 0.46,
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.initial_tetrahydrofolate",
"description": "Initial Tetrahydrofolate. Sets the initial value of bundled SBML symbol `FH4`."
},
{
"name": "initial_dihydrofolate_reductase_free",
"label": "Dihydrofolate reductase free",
"units": "native SBML value",
"default": 0.64,
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.initial_dihydrofolate_reductase_free",
"description": "Initial Dihydrofolate reductase free. Sets the initial value of bundled SBML symbol `DHFRf`."
}
],
"outputs": [
{
"name": "dihydrofolate_free",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.dihydrofolate_free",
"description": "Dihydrofolate free observable. Maps to SBML symbol `FH2f`."
},
{
"name": "tetrahydrofolate",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.tetrahydrofolate",
"description": "Tetrahydrofolate observable. Maps to SBML symbol `FH4`."
},
{
"name": "10_formyl_dihydrofolate",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.10_formyl_dihydrofolate",
"description": "10 formyl dihydrofolate observable. Maps to SBML symbol `FFH2`."
},
{
"name": "dihydrofolate_reductase_free",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.dihydrofolate_reductase_free",
"description": "Dihydrofolate reductase free observable. Maps to SBML symbol `DHFRf`."
},
{
"name": "5_10_methylene_tetrahydrofolate",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.5_10_methylene_tetrahydrofolate",
"description": "5,10 methylene tetrahydrofolate observable. Maps to SBML symbol `CH2FH4`."
},
{
"name": "5_methyl_tetrahydrofolate",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.5_methyl_tetrahydrofolate",
"description": "5 methyl tetrahydrofolate observable. Maps to SBML symbol `CH3FH4`."
},
{
"name": "state",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.state",
"description": "Full raw SBML observable record for reproducibility and downstream visualisation."
},
{
"name": "summary",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.summary",
"description": "Change and peak summary across the simulated SBML observables."
},
{
"name": "species_labels",
"maps_to": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.species_labels",
"description": "Mapping from selected raw SBML observable symbols to display labels."
}
]
},
"tags": [
"biomodels_ebi",
"curated",
"faithful",
"metabolism",
"oncology",
"physiology",
"sbml",
"systemsbiology",
"tumor-growth"
],
"title": "Morrison1989 - Folate Cycle Lab",
"models": [
{
"path": "owned/models/oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model",
"alias": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model",
"provenance": {
"owned_path": "owned/models/oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model_state"
],
"from": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.state"
},
{
"to": [
"visualisation.oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model_summary"
],
"from": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.summary"
},
{
"to": [
"visualisation.oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model_species_labels"
],
"from": "oncology_sbml_morrison1989_folate_cycle_biomd0000000018_model.species_labels"
}
],
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"description": "Morrison1989 - Folate Cycle The model describes the folate cyclekinetics in breast cancer cells. This model is described in the article: Folate cycle kinetics in human breast cancer cells.",
"schema_version": "2.0"
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