BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Koo2013 Shear Enos Expression Lab

About lab

shear-stress induced eNOS expression. Andrew Koo, David Nordsletten, Renato Umeton, Beracah Yankama, Shiva Ayyadurai, Guillermo García-Cardeña & C. It can be used to explore generegulation koo2013 shear stress induced enos dynamics and compare simulation behavior across conditions.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagekoo2013-shear-enos-expression-lab
Created2026-05-15
Updated2026-05-15
generegulationsbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "enos",
        "maps_to": "koo2013_shear_enos_expression.enos"
      },
      {
        "name": "klf2",
        "maps_to": "koo2013_shear_enos_expression.klf2"
      },
      {
        "name": "ap1",
        "maps_to": "koo2013_shear_enos_expression.ap1"
      },
      {
        "name": "active_ras",
        "maps_to": "koo2013_shear_enos_expression.active_ras"
      },
      {
        "name": "state",
        "maps_to": "koo2013_shear_enos_expression.state"
      },
      {
        "name": "summary",
        "maps_to": "koo2013_shear_enos_expression.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "koo2013_shear_enos_expression.species_labels"
      }
    ]
  },
  "title": "Koo2013 Shear Enos Expression Lab",
  "models": [
    {
      "path": "owned/models/koo2013_shear_enos_expression",
      "alias": "koo2013_shear_enos_expression",
      "parameters": {
        "model_path": "data/BIOMD0000000466.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/koo2013_shear_enos_expression"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.koo2013_shear_enos_expression_enos"
      ],
      "from": "koo2013_shear_enos_expression.enos"
    },
    {
      "to": [
        "visualisation.koo2013_shear_enos_expression_klf2"
      ],
      "from": "koo2013_shear_enos_expression.klf2"
    },
    {
      "to": [
        "visualisation.koo2013_shear_enos_expression_ap1"
      ],
      "from": "koo2013_shear_enos_expression.ap1"
    },
    {
      "to": [
        "visualisation.koo2013_shear_enos_expression_active_ras"
      ],
      "from": "koo2013_shear_enos_expression.active_ras"
    },
    {
      "to": [
        "visualisation.koo2013_shear_enos_expression_state"
      ],
      "from": "koo2013_shear_enos_expression.state"
    },
    {
      "to": [
        "visualisation.koo2013_shear_enos_expression_summary"
      ],
      "from": "koo2013_shear_enos_expression.summary"
    },
    {
      "to": [
        "visualisation.koo2013_shear_enos_expression_species_labels"
      ],
      "from": "koo2013_shear_enos_expression.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "shear-stress induced eNOS expression. Andrew Koo, David Nordsletten, Renato Umeton, Beracah Yankama, Shiva Ayyadurai, Guillermo García-Cardeña & C. It can be used to explore generegulation koo2013 shear stress induced enos dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.