BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

DiCamillo2016 - Insulin signalling pathway - Rule-based model Lab

About lab

Clean Biosimulant lab for metabolic and hormone-linked signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagedicamillo2016-insulin-signalling-pathway-rule-based-model-lab
Created2026-05-16
Updated2026-05-16
signalingsystemssystems-biologysbmlfaithfulbiomodels_ebimetabolic-signalinghormone-signalingvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_amino_acids_input",
        "label": "Amino Acids Input",
        "maps_to": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.initial_amino_acids_input",
        "description": "Amino Acids Input source parameter. Maps to SBML symbol `Amino_Acids_input` and preserves the bundled default."
      }
    ],
    "outputs": [
      {
        "name": "akt_s474_u_t309_u",
        "label": "AKT S474 U T309 U",
        "maps_to": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.akt_s474_u_t309_u",
        "description": "AKT S474 U T309 U. Maps to SBML symbol `S15` and is emitted in native SBML units."
      },
      {
        "name": "gs_sh2_state_a",
        "label": "GS SH2 State A",
        "maps_to": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.gs_sh2_state_a",
        "description": "GS SH2 State A. Maps to SBML symbol `S20` and is emitted in native SBML units."
      },
      {
        "name": "ras_gap_bs",
        "label": "RAS GAP Bs",
        "maps_to": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.ras_gap_bs",
        "description": "RAS GAP Bs. Maps to SBML symbol `S21` and is emitted in native SBML units."
      },
      {
        "name": "state",
        "label": "Observable state",
        "maps_to": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Observable labels",
        "maps_to": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.species_labels"
      }
    ]
  },
  "tags": [
    "signaling",
    "systems",
    "systems-biology",
    "sbml",
    "faithful",
    "biomodels_ebi",
    "metabolic-signaling",
    "hormone-signaling"
  ],
  "title": "DiCamillo2016 - Insulin signalling pathway - Rule-based model Lab",
  "models": [
    {
      "path": "owned/models/signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model",
      "alias": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model",
      "provenance": {
        "owned_path": "owned/models/signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model_state"
      ],
      "from": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.state"
    },
    {
      "to": [
        "visualisation.signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model_summary"
      ],
      "from": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.summary"
    },
    {
      "to": [
        "visualisation.signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model_species_labels"
      ],
      "from": "signaling_sbml_dicamillo2016_insulin_signalling_pathway_rule_ba_biomd0000000833_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Clean Biosimulant lab for metabolic and hormone-linked signaling. Values are native SBML quantities; equations, parameters, and initial values remain in the bundled source file.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.