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Rosas2015 Caffeine Induced Luminal Sr Calcium Changes Lab

About lab

This SBML model reproduced the calcium release from SR by application of 20 mM or 2mM caffeine, described in the paper. * Ca_i_Total and Ca_SR_Total respectively represent the total calcium concentrat.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagerosas2015-caffeine-induced-luminal-sr-calcium-changes-lab
Created2026-05-17
Updated2026-05-17
physiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_ca_sr_total",
        "label": "Initial Ca Sr Total",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.initial_ca_sr_total",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mwd805cc43_4a96_472f_a894_c119a6aa895f`."
      },
      {
        "name": "initial_ca_sr",
        "label": "Initial Ca Sr",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.initial_ca_sr",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mw447078ee_8bc8_4358_abcd_ade10dba93b0`."
      },
      {
        "name": "initial_ca_i_total",
        "label": "Initial Ca I Total",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.initial_ca_i_total",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mw40a96ef6_32da_46d1_9712_4f53f60bad43`."
      },
      {
        "name": "initial_ca_i",
        "label": "Initial Ca I",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.initial_ca_i",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mwe1a0a651_d2d5_4f75_8d45_9336c60eb9a6`."
      },
      {
        "name": "initial_caff",
        "label": "Initial Caff",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.initial_caff",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `mw168e0d8a_b9f7_4d4c_b437_a81206c5d381`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.species_labels"
      },
      {
        "name": "ca_sr_total",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.ca_sr_total"
      },
      {
        "name": "ca_sr",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.ca_sr"
      },
      {
        "name": "ca_i_total",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.ca_i_total"
      },
      {
        "name": "ca_i",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.ca_i"
      },
      {
        "name": "caff",
        "maps_to": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.caff"
      }
    ]
  },
  "tags": [
    "physiology",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Rosas2015 Caffeine Induced Luminal Sr Calcium Changes Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model",
      "alias": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model_state"
      ],
      "from": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model_summary"
      ],
      "from": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model_species_labels"
      ],
      "from": "systemsbiology_sbml_rosas2015_caffeine_induced_luminal_sr_calcium_ch_biomd0000000601_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This SBML model reproduced the calcium release from SR by application of 20 mM or 2mM caffeine, described in the paper. * Ca_i_Total and Ca_SR_Total respectively represent the total calcium concentrat.",
  "schema_version": "2.0"
}

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