BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

Cuadros2020 - SIHRD spatiotemporal model of COVID-19 transmission in Ohio Lab

About lab

Single-model lab wrapper for Cuadros2020 - SIHRD spatiotemporal model of COVID-19 transmission in Ohio. The role of geospatial disparities in the dynamics of the COVID-19 pandemic is poorly understood. We developed a spatially-explicit mathematical model to simulate transmission dynamics of COVID-19 dis.

Runtime

Duration10
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagecuadros2020-sihrd-spatiotemporal-model-of-covid-19-transmission
Created2026-05-15
Updated2026-05-15
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "airport_county_transmission_rate",
        "label": "Airport County Transmission Rate",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.airport_county_transmission_rate"
      },
      {
        "name": "highway_county_transmission_rate",
        "label": "Highway County Transmission Rate",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.highway_county_transmission_rate"
      },
      {
        "name": "low_risk_county_transmission_rate",
        "label": "Low Risk County Transmission Rate",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.low_risk_county_transmission_rate"
      },
      {
        "name": "recovery_rate",
        "label": "Recovery Rate",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.recovery_rate"
      },
      {
        "name": "hospital_to_icu_rate",
        "label": "Hospital To Icu Rate",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.hospital_to_icu_rate"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Model state",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Species labels",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.species_labels"
      },
      {
        "name": "infected_low_risk_counties",
        "label": "Infected Low risk counties",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.infected_low_risk_counties"
      },
      {
        "name": "infected_counties_with_airports",
        "label": "Infected Counties with airports",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.infected_counties_with_airports"
      },
      {
        "name": "infected_counties_with_highways",
        "label": "Infected Counties with highways",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.infected_counties_with_highways"
      },
      {
        "name": "hospitalised_low_risk_counties",
        "label": "Hospitalised Low risk counties",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.hospitalised_low_risk_counties"
      },
      {
        "name": "hospitalised_counties_with_airports",
        "label": "Hospitalised Counties with airports",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.hospitalised_counties_with_airports"
      },
      {
        "name": "hospitalised_counties_with_highways",
        "label": "Hospitalised Counties with highways",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.hospitalised_counties_with_highways"
      },
      {
        "name": "icu_low_risk_counties",
        "label": "ICU Low risk counties",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.icu_low_risk_counties"
      },
      {
        "name": "icu_counties_with_airports",
        "label": "ICU Counties with airports",
        "maps_to": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.icu_counties_with_airports"
      }
    ]
  },
  "title": "Cuadros2020 - SIHRD spatiotemporal model of COVID-19 transmission in Ohio Lab",
  "models": [
    {
      "path": "owned/models/epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model",
      "alias": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model",
      "parameters": {
        "model_path": "data/BIOMD0000000969.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model_state"
      ],
      "from": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.state"
    },
    {
      "to": [
        "visualisation.epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model_summary"
      ],
      "from": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.summary"
    },
    {
      "to": [
        "visualisation.epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model_species_labels"
      ],
      "from": "epidemiology_sbml_cuadros2020_sihrd_spatiotemporal_model_of_covid_biomd0000000969_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Single-model lab wrapper for Cuadros2020 - SIHRD spatiotemporal model of COVID-19 transmission in Ohio. The role of geospatial disparities in the dynamics of the COVID-19 pandemic is poorly understood. We developed a spatially-explicit mathematical model to simulate transmission dynamics of COVID-19 dis.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.