Flis2015 Plant Clock Gene Circuit 4 Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_c_l_m",
        "label": "Initial C L M",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.initial_c_l_m",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cL_m`."
      },
      {
        "name": "initial_model_state_c_p",
        "label": "Initial Model State C P",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.initial_model_state_c_p",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cP`."
      },
      {
        "name": "initial_c_cop1n",
        "label": "Initial C Cop1n",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.initial_c_cop1n",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cCOP1n`."
      },
      {
        "name": "initial_c_lux",
        "label": "Initial C Lux",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.initial_c_lux",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cLUX`."
      },
      {
        "name": "initial_model_state_c_l",
        "label": "Initial Model State C L",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.initial_model_state_c_l",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cL`."
      },
      {
        "name": "initial_c_p7_m",
        "label": "Initial C P7 M",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.initial_c_p7_m",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cP7_m`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.species_labels"
      },
      {
        "name": "c_l_m",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.c_l_m"
      },
      {
        "name": "c_p",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.c_p"
      },
      {
        "name": "c_cop1n",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.c_cop1n"
      },
      {
        "name": "c_lux",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.c_lux"
      },
      {
        "name": "c_l",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.c_l"
      },
      {
        "name": "c_p7_m",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.c_p7_m"
      }
    ]
  },
  "tags": [
    "generegulation",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Flis2015 Plant Clock Gene Circuit 4 Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model",
      "alias": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model_state"
      ],
      "from": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model_summary"
      ],
      "from": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model_species_labels"
      ],
      "from": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_4_1_plm_model1510190003_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "cL_m_degr, param m1, modified to ensure light rate > dark rate. It can be used to explore systemsbiology flis2015 plant clock gene circuit dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}