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MODEL1704110000 Variant Proctor2017 Identifying Microrna For Muscle Regeneration During Ageing Lab

About lab

Proctor2017 - Identifying microRNA for muscle regeneration during ageing (Mir1_in_muscle) This model is described in the article: Using computer simulation models to investigate the most promising mic. It can be used to explore systemsbiology proctor2017 identifying microrna for muscle dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagemodel1704110000-proctor2017-identifying-microrna-for-muscle-rege
Created2026-05-17
Updated2026-05-17
generegulationphysiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_myo_d",
        "label": "Initial Myo D",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_myo_d",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `MyoD`."
      },
      {
        "name": "initial_mi_r1",
        "label": "Initial Mi R1",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_mi_r1",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `miR1`."
      },
      {
        "name": "initial_pax3_mrna",
        "label": "Initial Pax3 MRNA",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_pax3_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pax3_mRNA`."
      },
      {
        "name": "initial_pax3",
        "label": "Initial Pax3",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_pax3",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pax3`."
      },
      {
        "name": "initial_myo_d_gene",
        "label": "Initial Myo D Gene",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_myo_d_gene",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `MyoD_gene`."
      },
      {
        "name": "initial_mi_r1_gene",
        "label": "Initial Mi R1 Gene",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.initial_mi_r1_gene",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `miR1_gene`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.species_labels"
      },
      {
        "name": "myo_d",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.myo_d"
      },
      {
        "name": "mi_r1",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.mi_r1"
      },
      {
        "name": "pax3_mrna",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.pax3_mrna"
      },
      {
        "name": "pax3",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.pax3"
      },
      {
        "name": "myo_d_gene",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.myo_d_gene"
      },
      {
        "name": "mi_r1_gene",
        "maps_to": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.mi_r1_gene"
      }
    ]
  },
  "tags": [
    "generegulation",
    "physiology",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "MODEL1704110000 Variant Proctor2017 Identifying Microrna For Muscle Regeneration During Ageing Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model",
      "alias": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model_state"
      ],
      "from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model_summary"
      ],
      "from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model_species_labels"
      ],
      "from": "systemsbiology_sbml_proctor2017_identifying_microrna_for_muscle_rege_model1704110000_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Proctor2017 - Identifying microRNA for muscle regeneration during ageing (Mir1_in_muscle) This model is described in the article: Using computer simulation models to investigate the most promising mic. It can be used to explore systemsbiology proctor2017 identifying microrna for muscle dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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