About lab
Xenopus histone expression kinetics. This model is described in the article: Kinetics of histone gene expression during early development of Xenopus laevis. It can be used to explore generegulation koster1988 histone expression model5954483266 dynamics and compare simulation behavior across conditions.
Runtime
Duration10
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagekoster1988-histone-expression-lab
Created2026-05-15
Updated2026-05-15
generegulationsbmlbiomodels_ebifaithfulvisualisation
Manifest
{
"io": {
"inputs": [],
"outputs": [
{
"name": "histone_rna",
"maps_to": "koster1988_histone_expression.histone_rna"
},
{
"name": "histone_protein",
"maps_to": "koster1988_histone_expression.histone_protein"
},
{
"name": "state",
"maps_to": "koster1988_histone_expression.state"
},
{
"name": "summary",
"maps_to": "koster1988_histone_expression.summary"
},
{
"name": "species_labels",
"maps_to": "koster1988_histone_expression.species_labels"
}
]
},
"title": "Koster1988 Histone Expression Lab",
"models": [
{
"path": "owned/models/koster1988_histone_expression",
"alias": "koster1988_histone_expression",
"parameters": {
"model_path": "data/MODEL5954483266.xml",
"integration_step": 0.1
},
"provenance": {
"owned_path": "owned/models/koster1988_histone_expression"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.koster1988_histone_expression_histone_rna"
],
"from": "koster1988_histone_expression.histone_rna"
},
{
"to": [
"visualisation.koster1988_histone_expression_histone_protein"
],
"from": "koster1988_histone_expression.histone_protein"
},
{
"to": [
"visualisation.koster1988_histone_expression_state"
],
"from": "koster1988_histone_expression.state"
},
{
"to": [
"visualisation.koster1988_histone_expression_summary"
],
"from": "koster1988_histone_expression.summary"
},
{
"to": [
"visualisation.koster1988_histone_expression_species_labels"
],
"from": "koster1988_histone_expression.species_labels"
}
],
"runtime": {
"duration": 10,
"initial_inputs": {},
"communication_step": 1
},
"description": "Xenopus histone expression kinetics. This model is described in the article: Kinetics of histone gene expression during early development of Xenopus laevis. It can be used to explore generegulation koster1988 histone expression model5954483266 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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