Flis2015 Plant Clock Gene Circuit Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_c_l_m",
        "label": "Initial C L M",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.initial_c_l_m",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cL_m`."
      },
      {
        "name": "initial_model_state_c_p",
        "label": "Initial Model State C P",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.initial_model_state_c_p",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cP`."
      },
      {
        "name": "initial_c_cop1n",
        "label": "Initial C Cop1n",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.initial_c_cop1n",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cCOP1n`."
      },
      {
        "name": "initial_c_lux",
        "label": "Initial C Lux",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.initial_c_lux",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cLUX`."
      },
      {
        "name": "initial_model_state_c_l",
        "label": "Initial Model State C L",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.initial_model_state_c_l",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cL`."
      },
      {
        "name": "initial_c_p7_m",
        "label": "Initial C P7 M",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.initial_c_p7_m",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `cP7_m`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.species_labels"
      },
      {
        "name": "c_l_m",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.c_l_m"
      },
      {
        "name": "c_p",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.c_p"
      },
      {
        "name": "c_cop1n",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.c_cop1n"
      },
      {
        "name": "c_lux",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.c_lux"
      },
      {
        "name": "c_l",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.c_l"
      },
      {
        "name": "c_p7_m",
        "maps_to": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.c_p7_m"
      }
    ]
  },
  "tags": [
    "generegulation",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Flis2015 Plant Clock Gene Circuit Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model",
      "alias": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model_state"
      ],
      "from": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model_summary"
      ],
      "from": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model_species_labels"
      ],
      "from": "systemsbiology_sbml_flis2015_plant_clock_gene_circuit_p2011_1_2_plm_biomd0000000597_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Flis2015 - Plant clock gene circuit(P2011.1.2 PLM_71 ver 1) This model is described in the article: Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open. It can be used to explore systemsbiology flis2015 plant clock gene circuit dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}