About lab
SBML level 2 code generated for the JWS Online project by Jacky Snoep using PySCeS Run this model online at http://jjj.biochem.sun.ac.za To cite JWS Online please refer to: Olivier, B.G. It can be used to explore systemsbiology hornberg2005 erkcascade BioModels0000000084 dynamics and compare simulation behavior across conditions.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagehornberg2005-erkcascade-lab
Created2026-05-17
Updated2026-05-17
cellcyclegeneregulationsignalingsystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_model_state_x3",
"label": "Initial Model State X3",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.initial_model_state_x3",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x3`."
},
{
"name": "initial_model_state_x2",
"label": "Initial Model State X2",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.initial_model_state_x2",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x2`."
},
{
"name": "initial_model_state_x1",
"label": "Initial Model State X1",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.initial_model_state_x1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x1`."
},
{
"name": "initial_x3_p",
"label": "Initial X3 P",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.initial_x3_p",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x3p`."
},
{
"name": "initial_x2_p",
"label": "Initial X2 P",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.initial_x2_p",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x2p`."
},
{
"name": "initial_x1_p",
"label": "Initial X1 P",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.initial_x1_p",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `x1p`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.species_labels"
},
{
"name": "model_state_x3",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.model_state_x3"
},
{
"name": "model_state_x2",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.model_state_x2"
},
{
"name": "model_state_x1",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.model_state_x1"
},
{
"name": "x3_p",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.x3_p"
},
{
"name": "x2_p",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.x2_p"
},
{
"name": "x1_p",
"maps_to": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.x1_p"
}
]
},
"tags": [
"cellcycle",
"generegulation",
"signaling",
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Hornberg2005 Erkcascade Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model",
"alias": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model_state"
],
"from": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model_summary"
],
"from": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model_species_labels"
],
"from": "systemsbiology_sbml_hornberg2005_erkcascade_biomd0000000084_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "SBML level 2 code generated for the JWS Online project by Jacky Snoep using PySCeS Run this model online at http://jjj.biochem.sun.ac.za To cite JWS Online please refer to: Olivier, B.G. It can be used to explore systemsbiology hornberg2005 erkcascade BioModels0000000084 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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