Swat2004 - Bifurcation Analysis Regulatory Modules Mammalian G1 S Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_ap_1",
        "label": "Initial Ap 1",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.initial_ap_1",
        "description": "Initial value for Ap 1. Maps to source symbol `AP_1`. Units: substance. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "substance"
        ]
      },
      {
        "name": "initial_cyc_d_a",
        "label": "Initial Cyc D A",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.initial_cyc_d_a",
        "description": "Initial value for Cyc D A. Maps to source symbol `CycD_a`. Units: substance. Naming evidence: source symbol, component, or units provide a direct public name.",
        "accepted_units": [
          "substance"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.variable_labels"
      },
      {
        "name": "ap_1",
        "label": "Ap 1",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.ap_1",
        "description": "Ap 1. Maps to source symbol `AP_1`. Units: substance. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cyc_d_a",
        "label": "Cyc D A",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.cyc_d_a",
        "description": "Cyc D A. Maps to source symbol `CycD_a`. Units: substance. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cyc_d_i",
        "label": "Cyc D I",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.cyc_d_i",
        "description": "Cyc D I. Maps to source symbol `CycD_i`. Units: substance. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cyc_e_a",
        "label": "Cyc E A",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.cyc_e_a",
        "description": "Cyc E A. Maps to source symbol `CycE_a`. Units: substance. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "cyc_e_i",
        "label": "Cyc E I",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.cyc_e_i",
        "description": "Cyc E I. Maps to source symbol `CycE_i`. Units: substance. Naming evidence: source symbol, component, or units provide a direct public name."
      },
      {
        "name": "e2_f1",
        "label": "E2 F1",
        "maps_to": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.e2_f1",
        "description": "E2 F1. Maps to source symbol `E2F1`. Units: substance. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Swat2004 - Bifurcation Analysis Regulatory Modules Mammalian G1 S Lab",
  "models": [
    {
      "path": "models/core",
      "alias": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model",
      "parameters": {
        "model_path": "data/swat_2004.cellml",
        "integration_step": 0.01
      }
    },
    {
      "path": "models/visualisation",
      "alias": "visualisation"
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model_state"
      ],
      "from": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model_summary"
      ],
      "from": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model_trajectory"
      ],
      "from": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model_variable_labels"
      ],
      "from": "physiology_cellml_swat_kel_and_herzel_2004_swatkelherzel2004_model.variable_labels"
    }
  ],
  "package": "swat2004-bifurcation-analysis-regulatory-modules-mammalian-g1-s",
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "version": "1.0.0",
  "description": "Source-faithful physiology lab for Swat, Kel and Herzel 2004. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}