About lab
Source-faithful physiology lab for Chang, Fujita, 1999. Public controls and outputs are mapped to real source symbols for transport physiology.
Runtime
Duration0.01
Comms Step0.01
Settle Steps1
Runs
Total0
Completed0
Failed0
Metadata
Packagechang1999-fujita-kinetic-thiazide-sensitive-na-cl-cotransporter
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_extracellular_transporter_sodium_chloride_complex",
"label": "Initial Extracellular Transporter Sodium Chloride Complex",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.initial_extracellular_transporter_sodium_chloride_complex",
"description": "Initial value for Extracellular Transporter Sodium Chloride Complex. Maps to source symbol `ENaCl`. Units: millimolar. Naming evidence: source metadata names `ENaCl` as `Extracellular Transporter-Sodium-Chloride Complex`.",
"accepted_units": [
"millimolar"
]
},
{
"name": "initial_chloride_concentration",
"label": "Initial Chloride Concentration (source ECl_)",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.initial_chloride_concentration",
"description": "Initial value for Chloride Concentration (source ECl_). Maps to source symbol `ECl_`. Units: millimolar. Naming evidence: chloride-like source symbol and concentration units support a conservative chloride concentration label.",
"accepted_units": [
"millimolar"
]
}
],
"outputs": [
{
"name": "state",
"label": "Selected Source State",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.state"
},
{
"name": "summary",
"label": "Simulation Summary",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.summary"
},
{
"name": "trajectory",
"label": "Source Trajectory",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.trajectory"
},
{
"name": "variable_labels",
"label": "Observable Labels",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.variable_labels"
},
{
"name": "chloride_concentration",
"label": "Chloride Concentration (source ECl_)",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.chloride_concentration",
"description": "Chloride Concentration (source ECl_). Maps to source symbol `ECl_`. Units: millimolar. Naming evidence: chloride-like source symbol and concentration units support a conservative chloride concentration label."
},
{
"name": "extracellular_transporter_chloride_complex",
"label": "Extracellular Transporter Chloride Complex",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.extracellular_transporter_chloride_complex",
"description": "Extracellular Transporter Chloride Complex. Maps to source symbol `ECl`. Units: millimolar. Naming evidence: source metadata names `ECl` as `Extracellular Transporter-Chloride Complex`."
},
{
"name": "extracellular_transporter",
"label": "Extracellular Transporter",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.extracellular_transporter",
"description": "Extracellular Transporter. Maps to source symbol `E`. Units: millimolar. Naming evidence: source metadata names `E` as `Extracellular Transporter`."
},
{
"name": "intracellular_transporter",
"label": "Intracellular Transporter",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.intracellular_transporter",
"description": "Intracellular Transporter. Maps to source symbol `E_`. Units: millimolar. Naming evidence: source metadata names `E_` as `Intracellular Transporter`."
},
{
"name": "extracellular_transporter_thiazide_diuretics_complex",
"label": "Extracellular Transporter Thiazide Diuretics Complex",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.extracellular_transporter_thiazide_diuretics_complex",
"description": "Extracellular Transporter Thiazide Diuretics Complex. Maps to source symbol `ED`. Units: millimolar. Naming evidence: source metadata names `ED` as `Extracellular Transporter-Thiazide Diuretics Complex`."
},
{
"name": "intracellular_transporter_thiazide_diuretics_complex",
"label": "Intracellular Transporter Thiazide Diuretics Complex",
"maps_to": "physiology_cellml_chang_fujita_1999_changfujita1999_model.intracellular_transporter_thiazide_diuretics_complex",
"description": "Intracellular Transporter Thiazide Diuretics Complex. Maps to source symbol `ED_`. Units: millimolar. Naming evidence: source metadata names `ED_` as `Intracellular Transporter-Thiazide Diuretics Complex`."
}
]
},
"title": "Chang1999 - Fujita Kinetic Thiazide Sensitive Na Cl Cotransporter Lab",
"models": [
{
"path": "owned/models/physiology_cellml_chang_fujita_1999_changfujita1999_model",
"alias": "physiology_cellml_chang_fujita_1999_changfujita1999_model",
"parameters": {
"model_path": "data/chang_fujita_1999.cellml",
"integration_step": 0.01
},
"provenance": {
"owned_path": "owned/models/physiology_cellml_chang_fujita_1999_changfujita1999_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.physiology_cellml_chang_fujita_1999_changfujita1999_model_state"
],
"from": "physiology_cellml_chang_fujita_1999_changfujita1999_model.state"
},
{
"to": [
"visualisation.physiology_cellml_chang_fujita_1999_changfujita1999_model_summary"
],
"from": "physiology_cellml_chang_fujita_1999_changfujita1999_model.summary"
},
{
"to": [
"visualisation.physiology_cellml_chang_fujita_1999_changfujita1999_model_trajectory"
],
"from": "physiology_cellml_chang_fujita_1999_changfujita1999_model.trajectory"
},
{
"to": [
"visualisation.physiology_cellml_chang_fujita_1999_changfujita1999_model_variable_labels"
],
"from": "physiology_cellml_chang_fujita_1999_changfujita1999_model.variable_labels"
}
],
"runtime": {
"duration": 0.01,
"settle_steps": 1,
"initial_inputs": {},
"communication_step": 0.01
},
"description": "Source-faithful physiology lab for Chang, Fujita, 1999. Public controls and outputs are mapped to real source symbols for transport physiology.",
"schema_version": "2.0"
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