Locke2008 Circadian Clock Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_clock_gene_mrna",
        "label": "Initial Clock Gene MRNA",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.initial_clock_gene_mrna",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `X1`."
      },
      {
        "name": "initial_clock_protein",
        "label": "Initial Clock Protein",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.initial_clock_protein",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Y1`."
      },
      {
        "name": "initial_transcriptional_repressor",
        "label": "Initial Transcriptional Repressor",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.initial_transcriptional_repressor",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Z1`."
      },
      {
        "name": "initial_clock_protein_2",
        "label": "Initial Clock Protein 2",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.initial_clock_protein_2",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Y2`."
      },
      {
        "name": "initial_clock_gene_mrna_2",
        "label": "Initial Clock Gene MRNA 2",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.initial_clock_gene_mrna_2",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `X2`."
      },
      {
        "name": "initial_transcriptional_repressor_2",
        "label": "Initial Transcriptional Repressor 2",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.initial_transcriptional_repressor_2",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Z2`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.species_labels"
      },
      {
        "name": "clock_gene_mrna",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.clock_gene_mrna"
      },
      {
        "name": "clock_protein",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.clock_protein"
      },
      {
        "name": "transcriptional_repressor",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.transcriptional_repressor"
      },
      {
        "name": "clock_protein_2",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.clock_protein_2"
      },
      {
        "name": "clock_gene_mrna_2",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.clock_gene_mrna_2"
      },
      {
        "name": "transcriptional_repressor_2",
        "maps_to": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.transcriptional_repressor_2"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Locke2008 Circadian Clock Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model",
      "alias": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model_state"
      ],
      "from": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model_summary"
      ],
      "from": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model_species_labels"
      ],
      "from": "systemsbiology_sbml_locke2008_circadian_clock_biomd0000000185_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "The model reproduces Fig 2A of the paper. It can be used to explore systemsbiology locke2008 circadian clock BioModels0000000185 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}