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Turner2015 - Human/Mosquito SEIR/SEI Model Lab

About lab

Single-model lab wrapper for Turner2015 - Human/Mosquito SEIR/SEI Model. Mathematical model of malaria transmission between humans and mosquitoes. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.

Runtime

Duration10
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packageturner2015-human-mosquito-seir-sei-model-lab
Created2026-05-15
Updated2026-05-15
biomodels_ebicuratedepidemiologyfaithfulsbmltelluriumvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "human_to_mosquito_transmission",
        "label": "Human To Mosquito Transmission",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.human_to_mosquito_transmission"
      },
      {
        "name": "mosquito_to_human_transmission",
        "label": "Mosquito To Human Transmission",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.mosquito_to_human_transmission"
      },
      {
        "name": "human_recovery_rate",
        "label": "Human Recovery Rate",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.human_recovery_rate"
      },
      {
        "name": "mosquito_mortality_rate",
        "label": "Mosquito Mortality Rate",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.mosquito_mortality_rate"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Model state",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation summary",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.summary"
      },
      {
        "name": "species_labels",
        "label": "Species labels",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.species_labels"
      },
      {
        "name": "exposed_human",
        "label": "Exposed Human",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.exposed_human"
      },
      {
        "name": "infected_human",
        "label": "Infected Human",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.infected_human"
      },
      {
        "name": "exposed_mosquito",
        "label": "Exposed Mosquito",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.exposed_mosquito"
      },
      {
        "name": "infected_mosquito",
        "label": "Infected Mosquito",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.infected_mosquito"
      },
      {
        "name": "susceptible_human",
        "label": "Susceptible Human",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.susceptible_human"
      },
      {
        "name": "susceptible_mosquito",
        "label": "Susceptible Mosquito",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.susceptible_mosquito"
      },
      {
        "name": "recovered",
        "label": "Recovered",
        "maps_to": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.recovered"
      }
    ]
  },
  "title": "Turner2015 - Human/Mosquito SEIR/SEI Model Lab",
  "models": [
    {
      "path": "owned/models/epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model",
      "alias": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model",
      "parameters": {
        "model_path": "data/MODEL1805220001.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model_state"
      ],
      "from": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.state"
    },
    {
      "to": [
        "visualisation.epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model_summary"
      ],
      "from": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.summary"
    },
    {
      "to": [
        "visualisation.epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model_species_labels"
      ],
      "from": "epidemiology_sbml_turner2015_human_mosquito_seir_sei_model_model1805220001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Single-model lab wrapper for Turner2015 - Human/Mosquito SEIR/SEI Model. Mathematical model of malaria transmission between humans and mosquitoes. It can be used to explore transmission dynamics and compare scenario outcomes across conditions.",
  "schema_version": "2.0"
}

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