About lab
The model reproduces FIG 11A and FIG 11B of the paper. However, please note that FIG 11B is a plot of normalised amounts versus time.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagesuh2004-kcnq-regulation-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_atp_c",
"label": "Initial ATP C",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.initial_atp_c",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `ATP_C`."
},
{
"name": "initial_pi_m",
"label": "Initial Pi M",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.initial_pi_m",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PI_M`."
},
{
"name": "initial_pip2_m",
"label": "Initial Pip2 M",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.initial_pip2_m",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PIP2_M`."
},
{
"name": "initial_mg2_c",
"label": "Initial MG2 C",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.initial_mg2_c",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Mg2_C`."
},
{
"name": "initial_pip_m",
"label": "Initial Pip M",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.initial_pip_m",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PIP_M`."
},
{
"name": "initial_ggdp_m",
"label": "Initial Ggdp M",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.initial_ggdp_m",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `GGDP_M`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.species_labels"
},
{
"name": "atp_c",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.atp_c"
},
{
"name": "pi_m",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.pi_m"
},
{
"name": "pip2_m",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.pip2_m"
},
{
"name": "mg2_c",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.mg2_c"
},
{
"name": "pip_m",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.pip_m"
},
{
"name": "ggdp_m",
"maps_to": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.ggdp_m"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Suh2004 Kcnq Regulation Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model",
"alias": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model_state"
],
"from": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model_summary"
],
"from": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model_species_labels"
],
"from": "systemsbiology_sbml_suh2004_kcnq_regulation_biomd0000000081_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "The model reproduces FIG 11A and FIG 11B of the paper. However, please note that FIG 11B is a plot of normalised amounts versus time.",
"schema_version": "2.0"
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