About lab
This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packageoda2006-tollliker-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_target_genes_br_ex_il_1_il_8_il_6_tnf_alpha_ifn_gamma_gm_csf_m_csf_br_i_nos_cox2_mhc_class_i_ii_e_selectin_beta_defensin2",
"label": "Initial Target Genes Br Ex Il 1 Il 8 Il 6 TNF Alpha Ifn Gamma Gm Csf M Csf Br I Nos Cox2 Mhc Class I Ii E Selectin Beta Defensin2",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_target_genes_br_ex_il_1_il_8_il_6_tnf_alpha_ifn_gamma_gm_csf_m_csf_br_i_nos_cox2_mhc_class_i_ii_e_selectin_beta_defensin2",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1290`."
},
{
"name": "initial_target_genes_br_ex_cyclin_d1",
"label": "Initial Target Genes Br Ex Cyclin D1",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_target_genes_br_ex_cyclin_d1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1304`."
},
{
"name": "initial_cell_cycle",
"label": "Initial Cell Cycle",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_cell_cycle",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1138`."
},
{
"name": "initial_rna_br_metabolism",
"label": "Initial RNA Br Metabolism",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_rna_br_metabolism",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s805`."
},
{
"name": "initial_complex_rip1_traf6_ticam1",
"label": "Initial Complex Rip1 Traf6 Ticam1",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_complex_rip1_traf6_ticam1",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s288`."
},
{
"name": "initial_transcription",
"label": "Initial Transcription",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.initial_transcription",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1184`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.species_labels"
},
{
"name": "target_genes_br_ex_il_1_il_8_il_6_tnf_alpha_ifn_gamma_gm_csf_m_csf_br_i_nos_cox2_mhc_class_i_ii_e_selectin_beta_defensin2",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.target_genes_br_ex_il_1_il_8_il_6_tnf_alpha_ifn_gamma_gm_csf_m_csf_br_i_nos_cox2_mhc_class_i_ii_e_selectin_beta_defensin2"
},
{
"name": "target_genes_br_ex_cyclin_d1",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.target_genes_br_ex_cyclin_d1"
},
{
"name": "cell_cycle",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.cell_cycle"
},
{
"name": "rna_br_metabolism",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.rna_br_metabolism"
},
{
"name": "complex_rip1_traf6_ticam1",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.complex_rip1_traf6_ticam1"
},
{
"name": "transcription",
"maps_to": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.transcription"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Oda2006 Tollliker Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_oda2006_tollliker_model2463683119_model",
"alias": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_oda2006_tollliker_model2463683119_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_oda2006_tollliker_model2463683119_model_state"
],
"from": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_oda2006_tollliker_model2463683119_model_summary"
],
"from": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_oda2006_tollliker_model2463683119_model_species_labels"
],
"from": "systemsbiology_sbml_oda2006_tollliker_model2463683119_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team.",
"schema_version": "2.0"
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