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Wu2006 Atpsynthesis Skeletalmuscle Lab

About lab

This a model from the article: Oxidative ATP synthesis in skeletal muscle is controlled by substrate feedback. It can be used to explore systemsbiology wu2006 atpsynthesis skeletalmuscle model1006230034 dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagewu2006-atpsynthesis-skeletalmuscle-lab
Created2026-05-17
Updated2026-05-17
metabolismphysiologysystemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_q_x",
        "label": "Initial Model State Q X",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_model_state_q_x",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Q_x`."
      },
      {
        "name": "initial_pi_x",
        "label": "Initial Pi X",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_pi_x",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PI_x`."
      },
      {
        "name": "initial_pi_i",
        "label": "Initial Pi I",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_pi_i",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PI_i`."
      },
      {
        "name": "initial_pi_c",
        "label": "Initial Pi C",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_pi_c",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PI_c`."
      },
      {
        "name": "initial_ph_x",
        "label": "Initial Ph X",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_ph_x",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `pH_x`."
      },
      {
        "name": "initial_p_cr_c",
        "label": "Initial P Cr C",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.initial_p_cr_c",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `PCr_c`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.species_labels"
      },
      {
        "name": "q_x",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.q_x"
      },
      {
        "name": "pi_x",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.pi_x"
      },
      {
        "name": "pi_i",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.pi_i"
      },
      {
        "name": "pi_c",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.pi_c"
      },
      {
        "name": "ph_x",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.ph_x"
      },
      {
        "name": "p_cr_c",
        "maps_to": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.p_cr_c"
      }
    ]
  },
  "tags": [
    "metabolism",
    "physiology",
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Wu2006 Atpsynthesis Skeletalmuscle Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model",
      "alias": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model_state"
      ],
      "from": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model_summary"
      ],
      "from": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model_species_labels"
      ],
      "from": "systemsbiology_sbml_wu2006_atpsynthesis_skeletalmuscle_model1006230034_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This a model from the article: Oxidative ATP synthesis in skeletal muscle is controlled by substrate feedback. It can be used to explore systemsbiology wu2006 atpsynthesis skeletalmuscle model1006230034 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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