About lab
Angela Reynolds, Jonathan Rubin, Gilles Clermont, Judy Day, Yoram Vodovotz & G. It can be used to explore systemsbiology reynolds2006 reduced of the acute dynamics and compare simulation behavior across conditions.
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Duration1
Comms Step0.1
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Metadata
Packagereynolds2006-reduced-model-of-the-acute-inflammatory-response-la
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_anti_inflammatory_mediators_c_a",
"label": "Initial Anti Inflammatory Mediators C A",
"maps_to": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.initial_anti_inflammatory_mediators_c_a",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `C_A`."
},
{
"name": "initial_activated_phagocytes_nstar",
"label": "Initial Activated Phagocytes Nstar",
"maps_to": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.initial_activated_phagocytes_nstar",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Nstar`."
},
{
"name": "initial_pathogen_p",
"label": "Initial Pathogen P",
"maps_to": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.initial_pathogen_p",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `P`."
},
{
"name": "initial_tissue_damage_d",
"label": "Initial Tissue Damage D",
"maps_to": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.initial_tissue_damage_d",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `D`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.state"
},
{
"name": "summary",
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},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.species_labels"
},
{
"name": "anti_inflammatory_mediators_c_a",
"maps_to": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.anti_inflammatory_mediators_c_a"
},
{
"name": "activated_phagocytes_nstar",
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},
{
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},
{
"name": "tissue_damage_d",
"maps_to": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.tissue_damage_d"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Reynolds2006 Reduced Model Of The Acute Inflammatory Response Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model",
"alias": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model"
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},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
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},
{
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],
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},
{
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"from": "systemsbiology_sbml_reynolds2006_reduced_model_of_the_acute_inflamma_biomd0000000714_model.species_labels"
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],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "Angela Reynolds, Jonathan Rubin, Gilles Clermont, Judy Day, Yoram Vodovotz & G. It can be used to explore systemsbiology reynolds2006 reduced of the acute dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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