Salcedo-Sora2016 - Microbial folate biosynthesis and utilisation Lab

{
  "io": {
    "inputs": [
      {
        "name": "phosphoenolpyruvate_pool",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.phosphoenolpyruvate_pool"
      },
      {
        "name": "glutamine_pool",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.glutamine_pool"
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.state"
      },
      {
        "name": "summary",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.species_labels"
      },
      {
        "name": "deoxy_arabino_heptulosonate_phosphate",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.deoxy_arabino_heptulosonate_phosphate"
      },
      {
        "name": "phosphoenolpyruvate",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.phosphoenolpyruvate"
      },
      {
        "name": "phosphate",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.phosphate"
      },
      {
        "name": "dehydroquinate",
        "maps_to": "salcedosora2016_microbial_folate_biosynthesis.dehydroquinate"
      }
    ]
  },
  "title": "Salcedo-Sora2016 - Microbial folate biosynthesis and utilisation Lab",
  "models": [
    {
      "path": "owned/models/salcedosora2016_microbial_folate_biosynthesis",
      "alias": "salcedosora2016_microbial_folate_biosynthesis",
      "provenance": {
        "owned_path": "owned/models/salcedosora2016_microbial_folate_biosynthesis"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.salcedosora2016_microbial_folate_biosynthesis_state"
      ],
      "from": "salcedosora2016_microbial_folate_biosynthesis.state"
    },
    {
      "to": [
        "visualisation.salcedosora2016_microbial_folate_biosynthesis_summary"
      ],
      "from": "salcedosora2016_microbial_folate_biosynthesis.summary"
    },
    {
      "to": [
        "visualisation.salcedosora2016_microbial_folate_biosynthesis_species_labels"
      ],
      "from": "salcedosora2016_microbial_folate_biosynthesis.species_labels"
    },
    {
      "to": [
        "visualisation.salcedosora2016_microbial_folate_biosynthesis_deoxy_arabino_heptulosonate_phosphate"
      ],
      "from": "salcedosora2016_microbial_folate_biosynthesis.deoxy_arabino_heptulosonate_phosphate"
    },
    {
      "to": [
        "visualisation.salcedosora2016_microbial_folate_biosynthesis_phosphoenolpyruvate"
      ],
      "from": "salcedosora2016_microbial_folate_biosynthesis.phosphoenolpyruvate"
    },
    {
      "to": [
        "visualisation.salcedosora2016_microbial_folate_biosynthesis_phosphate"
      ],
      "from": "salcedosora2016_microbial_folate_biosynthesis.phosphate"
    },
    {
      "to": [
        "visualisation.salcedosora2016_microbial_folate_biosynthesis_dehydroquinate"
      ],
      "from": "salcedosora2016_microbial_folate_biosynthesis.dehydroquinate"
    }
  ],
  "runtime": {
    "duration": 2,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Curated microbiology lab for Salcedo-Sora2016 - Microbial folate biosynthesis and utilisation. The bundled SBML is executed directly through Tellurium and visualised with conservative, source-traceable labels.",
  "schema_version": "2.0"
}