Ciliberto2003_Swe1Network Lab

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "clb2_mitotic_cyclin",
        "label": "Clb2 mitotic cyclin",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.clb2_mitotic_cyclin",
        "description": "Tracks Clb2 mitotic cyclin in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.clb2_mitotic_cyclin`."
      },
      {
        "name": "phosphorylated_clb2",
        "label": "Phosphorylated Clb2",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.phosphorylated_clb2",
        "description": "Tracks Phosphorylated Clb2 in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.phosphorylated_clb2`."
      },
      {
        "name": "trimer_complex",
        "label": "Trimer complex",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.trimer_complex",
        "description": "Tracks Trimer complex in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.trimer_complex`."
      },
      {
        "name": "phosphorylated_trimer_complex",
        "label": "Phosphorylated trimer complex",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.phosphorylated_trimer_complex",
        "description": "Tracks Phosphorylated trimer complex in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.phosphorylated_trimer_complex`."
      },
      {
        "name": "mcm_a",
        "label": "Mcm A",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.mcm_a",
        "description": "Tracks Mcm A in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.mcm_a`."
      },
      {
        "name": "sic1_cdk_inhibitor",
        "label": "Sic1 CDK inhibitor",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.sic1_cdk_inhibitor",
        "description": "Tracks Sic1 CDK inhibitor in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.sic1_cdk_inhibitor`."
      },
      {
        "name": "mih1_a",
        "label": "Mih1 A",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.mih1_a",
        "description": "Tracks Mih1 A in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.mih1_a`."
      },
      {
        "name": "ie_a",
        "label": "IE A",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.ie_a",
        "description": "Tracks IE A in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.ie_a`."
      },
      {
        "name": "cdc20_a",
        "label": "Cdc20 A",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.cdc20_a",
        "description": "Tracks Cdc20 A in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.cdc20_a`."
      },
      {
        "name": "cdc20_apc_c_activator",
        "label": "Cdc20 APC/C activator",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.cdc20_apc_c_activator",
        "description": "Tracks Cdc20 APC/C activator in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.cdc20_apc_c_activator`."
      },
      {
        "name": "cdh1_a",
        "label": "Cdh1 A",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.cdh1_a",
        "description": "Tracks Cdh1 A in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.cdh1_a`."
      },
      {
        "name": "g1_cyclin_pool",
        "label": "G1 cyclin pool",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.g1_cyclin_pool",
        "description": "Tracks G1 cyclin pool in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.g1_cyclin_pool`."
      },
      {
        "name": "sbf_a",
        "label": "SBF A",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.sbf_a",
        "description": "Tracks SBF A in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.sbf_a`."
      },
      {
        "name": "swe1_inhibitory_kinase",
        "label": "Swe1 inhibitory kinase",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.swe1_inhibitory_kinase",
        "description": "Tracks Swe1 inhibitory kinase in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.swe1_inhibitory_kinase`."
      },
      {
        "name": "phosphorylated_swe1",
        "label": "Phosphorylated Swe1",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.phosphorylated_swe1",
        "description": "Tracks Phosphorylated Swe1 in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.phosphorylated_swe1`."
      },
      {
        "name": "membrane_associated_swe1",
        "label": "Membrane-associated Swe1",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.membrane_associated_swe1",
        "description": "Tracks Membrane-associated Swe1 in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.membrane_associated_swe1`."
      },
      {
        "name": "membrane_associated_phosphorylated_swe1",
        "label": "Membrane-associated phosphorylated Swe1",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.membrane_associated_phosphorylated_swe1",
        "description": "Tracks Membrane-associated phosphorylated Swe1 in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.membrane_associated_phosphorylated_swe1`."
      },
      {
        "name": "model_state_be",
        "label": "Model state BE",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.model_state_be",
        "description": "Tracks Model state BE in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.model_state_be`."
      },
      {
        "name": "model_state_m_m",
        "label": "Model state M (M)",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.model_state_m_m",
        "description": "Tracks Model state M (M) in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.model_state_m_m`."
      },
      {
        "name": "budding_index",
        "label": "Budding index",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.budding_index",
        "description": "Tracks Budding index in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.budding_index`."
      },
      {
        "name": "cdh1_apc_c_activator",
        "label": "Cdh1 APC/C activator",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.cdh1_apc_c_activator",
        "description": "Tracks Cdh1 APC/C activator in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.cdh1_apc_c_activator`."
      },
      {
        "name": "model_state_ie",
        "label": "Model state IE",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.model_state_ie",
        "description": "Tracks Model state IE in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.model_state_ie`."
      },
      {
        "name": "mcm_replication_licensing_complex",
        "label": "MCM replication licensing complex",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.mcm_replication_licensing_complex",
        "description": "Tracks MCM replication licensing complex in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.mcm_replication_licensing_complex`."
      },
      {
        "name": "mih1_activating_phosphatase",
        "label": "Mih1 activating phosphatase",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.mih1_activating_phosphatase",
        "description": "Tracks Mih1 activating phosphatase in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.mih1_activating_phosphatase`."
      },
      {
        "name": "sbf_transcription_factor",
        "label": "SBF transcription factor",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.sbf_transcription_factor",
        "description": "Tracks SBF transcription factor in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.sbf_transcription_factor`."
      },
      {
        "name": "swe1_total",
        "label": "Swe1 Total",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.swe1_total",
        "description": "Tracks Swe1 Total in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.swe1_total`."
      },
      {
        "name": "kmih",
        "label": "Kmih",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.kmih",
        "description": "Tracks Kmih in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.kmih`."
      },
      {
        "name": "kswe",
        "label": "Kswe",
        "maps_to": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.kswe",
        "description": "Tracks Kswe in the lab model via `cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.kswe`."
      }
    ]
  },
  "title": "Ciliberto2003_Swe1Network Lab",
  "models": [
    {
      "path": "owned/models/cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model",
      "alias": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model",
      "provenance": {
        "owned_path": "owned/models/cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model_state"
      ],
      "from": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.state"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model_summary"
      ],
      "from": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.summary"
    },
    {
      "to": [
        "visualisation.cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model_species_labels"
      ],
      "from": "cellcycle_sbml_ciliberto2003_swe1network_model0913285268_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "Single-model lab wrapper for Ciliberto2003_Swe1Network. This a model from the article: Mathematical model of the morphogenesis checkpoint in budding yeast. It can be used to explore cell-cycle regulation dynamics and compare checkpoint behavior across conditions.",
  "schema_version": "2.0"
}