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Rantasalo2016 Constitutive Stf Vp16 Ed Lab

About lab

constitutive synthetic expression modulator promoter variant. Rantasalo2015-Synthetic_expresion_modulator_constitutiveSTF_VP16_pBID2-EDcorePromoterThis model is part of a family of models describing a modular synthetic expression system that modulates the expres. It can be used to explore generegulation rantasalo2016 synthetic expresion modulator cons dynamics and compare simulation behavior across conditions.

Runtime

Duration10
Comms Step1

Runs

Total0
Completed0
Failed0

Metadata

Packagerantasalo2016-constitutive-stf-vp16-ed-lab
Created2026-05-15
Updated2026-05-15
generegulationsbmlbiomodels_ebifaithfulvisualisation

Manifest

{
  "io": {
    "inputs": [],
    "outputs": [
      {
        "name": "mcherry_messenger_rna",
        "maps_to": "rantasalo2016_constitutive_stf_vp16_ed.mcherry_messenger_rna"
      },
      {
        "name": "mcherry_reporter",
        "maps_to": "rantasalo2016_constitutive_stf_vp16_ed.mcherry_reporter"
      },
      {
        "name": "cytosolic_transcription_factor",
        "maps_to": "rantasalo2016_constitutive_stf_vp16_ed.cytosolic_transcription_factor"
      },
      {
        "name": "nuclear_transcription_factor",
        "maps_to": "rantasalo2016_constitutive_stf_vp16_ed.nuclear_transcription_factor"
      },
      {
        "name": "state",
        "maps_to": "rantasalo2016_constitutive_stf_vp16_ed.state"
      },
      {
        "name": "summary",
        "maps_to": "rantasalo2016_constitutive_stf_vp16_ed.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "rantasalo2016_constitutive_stf_vp16_ed.species_labels"
      }
    ]
  },
  "title": "Rantasalo2016 Constitutive Stf Vp16 Ed Lab",
  "models": [
    {
      "path": "owned/models/rantasalo2016_constitutive_stf_vp16_ed",
      "alias": "rantasalo2016_constitutive_stf_vp16_ed",
      "parameters": {
        "model_path": "data/MODEL1510230003.xml",
        "integration_step": 0.1
      },
      "provenance": {
        "owned_path": "owned/models/rantasalo2016_constitutive_stf_vp16_ed"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.rantasalo2016_constitutive_stf_vp16_ed_mcherry_messenger_rna"
      ],
      "from": "rantasalo2016_constitutive_stf_vp16_ed.mcherry_messenger_rna"
    },
    {
      "to": [
        "visualisation.rantasalo2016_constitutive_stf_vp16_ed_mcherry_reporter"
      ],
      "from": "rantasalo2016_constitutive_stf_vp16_ed.mcherry_reporter"
    },
    {
      "to": [
        "visualisation.rantasalo2016_constitutive_stf_vp16_ed_cytosolic_transcription_factor"
      ],
      "from": "rantasalo2016_constitutive_stf_vp16_ed.cytosolic_transcription_factor"
    },
    {
      "to": [
        "visualisation.rantasalo2016_constitutive_stf_vp16_ed_nuclear_transcription_factor"
      ],
      "from": "rantasalo2016_constitutive_stf_vp16_ed.nuclear_transcription_factor"
    },
    {
      "to": [
        "visualisation.rantasalo2016_constitutive_stf_vp16_ed_state"
      ],
      "from": "rantasalo2016_constitutive_stf_vp16_ed.state"
    },
    {
      "to": [
        "visualisation.rantasalo2016_constitutive_stf_vp16_ed_summary"
      ],
      "from": "rantasalo2016_constitutive_stf_vp16_ed.summary"
    },
    {
      "to": [
        "visualisation.rantasalo2016_constitutive_stf_vp16_ed_species_labels"
      ],
      "from": "rantasalo2016_constitutive_stf_vp16_ed.species_labels"
    }
  ],
  "runtime": {
    "duration": 10,
    "initial_inputs": {},
    "communication_step": 1
  },
  "description": "constitutive synthetic expression modulator promoter variant. Rantasalo2015-Synthetic_expresion_modulator_constitutiveSTF_VP16_pBID2-EDcorePromoterThis model is part of a family of models describing a modular synthetic expression system that modulates the expres. It can be used to explore generegulation rantasalo2016 synthetic expresion modulator cons dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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