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Graham2013 Role Of Osteocytes In Targeted Bone Remodeling Lab

About lab

Jason M. It can be used to explore systemsbiology graham2013 role of osteocytes in dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

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Metadata

Packagegraham2013-role-of-osteocytes-in-targeted-bone-remodeling-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_osteocytes_s",
        "label": "Initial Osteocytes S",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_osteocytes_s",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Osteocytes__S`."
      },
      {
        "name": "initial_bone_volume_z",
        "label": "Initial Bone Volume Z",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_bone_volume_z",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Bone_volume__z`."
      },
      {
        "name": "initial_pre_osteoblasts_p",
        "label": "Initial Pre Osteoblasts P",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_pre_osteoblasts_p",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Pre_Osteoblasts__P`."
      },
      {
        "name": "initial_osteoclasts_c",
        "label": "Initial Osteoclasts C",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_osteoclasts_c",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Osteoclasts__C`."
      },
      {
        "name": "initial_osteoblasts_b",
        "label": "Initial Osteoblasts B",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.initial_osteoblasts_b",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Osteoblasts__B`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.species_labels"
      },
      {
        "name": "osteocytes_s",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.osteocytes_s"
      },
      {
        "name": "bone_volume_z",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.bone_volume_z"
      },
      {
        "name": "pre_osteoblasts_p",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.pre_osteoblasts_p"
      },
      {
        "name": "osteoclasts_c",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.osteoclasts_c"
      },
      {
        "name": "osteoblasts_b",
        "maps_to": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.osteoblasts_b"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Graham2013 Role Of Osteocytes In Targeted Bone Remodeling Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model",
      "alias": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model_state"
      ],
      "from": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model_summary"
      ],
      "from": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model_species_labels"
      ],
      "from": "systemsbiology_sbml_graham2013_role_of_osteocytes_in_targeted_bone_r_biomd0000000721_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Jason M. It can be used to explore systemsbiology graham2013 role of osteocytes in dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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