BiosimulantBiosimulant
Docs
Search labs...
Sign inGet Started

New Lab

About lab

Toy model used to validate DynafluxR, as detailed in the publication. It can be used to explore systemsbiology new model2502210001 dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagenew-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_model_state_a",
        "label": "Initial Model State A",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.initial_model_state_a",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `A`."
      },
      {
        "name": "initial_model_state_k",
        "label": "Initial Model State K",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.initial_model_state_k",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `K`."
      },
      {
        "name": "initial_model_state_j",
        "label": "Initial Model State J",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.initial_model_state_j",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `J`."
      },
      {
        "name": "initial_model_state_i",
        "label": "Initial Model State I",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.initial_model_state_i",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `I`."
      },
      {
        "name": "initial_model_state_h",
        "label": "Initial Model State H",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.initial_model_state_h",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `H`."
      },
      {
        "name": "initial_model_state_g",
        "label": "Initial Model State G",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.initial_model_state_g",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `G`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.species_labels"
      },
      {
        "name": "model_state_a",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.model_state_a"
      },
      {
        "name": "model_state_k",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.model_state_k"
      },
      {
        "name": "model_state_j",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.model_state_j"
      },
      {
        "name": "model_state_i",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.model_state_i"
      },
      {
        "name": "model_state_h",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.model_state_h"
      },
      {
        "name": "model_state_g",
        "maps_to": "systemsbiology_sbml_new_model_model2502210001_model.model_state_g"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "New Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_new_model_model2502210001_model",
      "alias": "systemsbiology_sbml_new_model_model2502210001_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_new_model_model2502210001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_new_model_model2502210001_model_state"
      ],
      "from": "systemsbiology_sbml_new_model_model2502210001_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_new_model_model2502210001_model_summary"
      ],
      "from": "systemsbiology_sbml_new_model_model2502210001_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_new_model_model2502210001_model_species_labels"
      ],
      "from": "systemsbiology_sbml_new_model_model2502210001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Toy model used to validate DynafluxR, as detailed in the publication. It can be used to explore systemsbiology new model2502210001 dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

Sign in to start your own run. Public-lab history stays visible here.

Select a run from History to view its results.