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Liu1999 - Mathematical Pulsatile Secretion Hypothalamic Pituitary Lab

About lab

Source-faithful physiology lab for Liu, Hu, Peng, Liu, 1999. Public controls and outputs are mapped to real source symbols for source-model physiology.

Runtime

Duration0.01
Comms Step0.01
Settle Steps1

Runs

Total0
Completed0
Failed0

Metadata

Packageliu1999-mathematical-pulsatile-secretion-hypothalamic-pituitary
Created2026-05-23
Updated2026-05-23
physiologycellmlphysiomefaithfulvisualisationother

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_acth",
        "label": "Initial Acth",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.initial_acth",
        "description": "Initial value for Acth. Maps to source symbol `x2`. Units: microg_l. Naming evidence: source metadata names `x2` as `ACTH`.",
        "accepted_units": [
          "microg_l"
        ]
      },
      {
        "name": "initial_albumin_bound_cortisol",
        "label": "Initial Albumin Bound Cortisol",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.initial_albumin_bound_cortisol",
        "description": "Initial value for Albumin Bound Cortisol. Maps to source symbol `x5`. Units: microg_l. Naming evidence: source metadata names `x5` as `albumin-bound cortisol`.",
        "accepted_units": [
          "microg_l"
        ]
      }
    ],
    "outputs": [
      {
        "name": "state",
        "label": "Selected Source State",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.state"
      },
      {
        "name": "summary",
        "label": "Simulation Summary",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.summary"
      },
      {
        "name": "trajectory",
        "label": "Source Trajectory",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.trajectory"
      },
      {
        "name": "variable_labels",
        "label": "Observable Labels",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.variable_labels"
      },
      {
        "name": "acth",
        "label": "Acth",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.acth",
        "description": "Acth. Maps to source symbol `x2`. Units: microg_l. Naming evidence: source metadata names `x2` as `ACTH`."
      },
      {
        "name": "albumin_bound_cortisol",
        "label": "Albumin Bound Cortisol",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.albumin_bound_cortisol",
        "description": "Albumin Bound Cortisol. Maps to source symbol `x5`. Units: microg_l. Naming evidence: source metadata names `x5` as `albumin-bound cortisol`."
      },
      {
        "name": "cbg_bound_cortisol",
        "label": "Cbg Bound Cortisol",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.cbg_bound_cortisol",
        "description": "Cbg Bound Cortisol. Maps to source symbol `x4`. Units: microg_l. Naming evidence: source metadata names `x4` as `CBG-bound cortisol`."
      },
      {
        "name": "crh",
        "label": "Crh",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.crh",
        "description": "Crh. Maps to source symbol `x1`. Units: microg_l. Naming evidence: source metadata names `x1` as `CRH`."
      },
      {
        "name": "free_cortisol",
        "label": "Free Cortisol",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.free_cortisol",
        "description": "Free Cortisol. Maps to source symbol `x3`. Units: microg_l. Naming evidence: source metadata names `x3` as `free cortisol`."
      },
      {
        "name": "a10",
        "label": "A10",
        "maps_to": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.a10",
        "description": "A10. Maps to source symbol `a10`. Units: first_order_rate_constant. Naming evidence: source symbol, component, or units provide a direct public name."
      }
    ]
  },
  "title": "Liu1999 - Mathematical Pulsatile Secretion Hypothalamic Pituitary Lab",
  "models": [
    {
      "path": "owned/models/physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model",
      "alias": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model",
      "parameters": {
        "model_path": "data/liu_hu_peng_liu_1999.cellml",
        "integration_step": 0.01
      },
      "provenance": {
        "owned_path": "owned/models/physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model_state"
      ],
      "from": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.state"
    },
    {
      "to": [
        "visualisation.physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model_summary"
      ],
      "from": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.summary"
    },
    {
      "to": [
        "visualisation.physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model_trajectory"
      ],
      "from": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.trajectory"
    },
    {
      "to": [
        "visualisation.physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model_variable_labels"
      ],
      "from": "physiology_cellml_liu_hu_peng_liu_1999_liuhupengliu1999_model.variable_labels"
    }
  ],
  "runtime": {
    "duration": 0.01,
    "settle_steps": 1,
    "initial_inputs": {},
    "communication_step": 0.01
  },
  "description": "Source-faithful physiology lab for Liu, Hu, Peng, Liu, 1999. Public controls and outputs are mapped to real source symbols for source-model physiology.",
  "schema_version": "2.0"
}

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