About lab
This model is a supplementary material of a manuscript'Diffusion driven metformin exchange transport rates between plasma and red blood cells'by Janis Kurlovics, Darta Maija Zake, Linda Zaharenko, Kri. It can be used to explore systemsbiology kurlovics2021 metformin partitioning from plasma dynamics and compare simulation behavior across conditions.
Runtime
Duration1
Comms Step0.1
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Metadata
Packagekurlovics2021-metformin-partitioning-from-plasma-to-rbc-single-c
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "initial_mrbc",
"label": "Initial Mrbc",
"maps_to": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model.initial_mrbc",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `Mrbc`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model.species_labels"
},
{
"name": "mrbc",
"maps_to": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model.mrbc"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Kurlovics2021 Metformin Partitioning From Plasma To Rbc Single Coefficie Lab",
"models": [
{
"path": "owned/models/systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model",
"alias": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model",
"provenance": {
"owned_path": "owned/models/systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model_state"
],
"from": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model.state"
},
{
"to": [
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],
"from": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model.summary"
},
{
"to": [
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],
"from": "systemsbiology_sbml_kurlovics2021_metformin_partitioning_from_plasma_biomd0000001040_model.species_labels"
}
],
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"description": "This model is a supplementary material of a manuscript'Diffusion driven metformin exchange transport rates between plasma and red blood cells'by Janis Kurlovics, Darta Maija Zake, Linda Zaharenko, Kri. It can be used to explore systemsbiology kurlovics2021 metformin partitioning from plasma dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
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