Smallbone2011 Trehalosebiosynthesis Lab

{
  "io": {
    "inputs": [
      {
        "name": "initial_glucose",
        "label": "Initial Glucose",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.initial_glucose",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `glx`."
      },
      {
        "name": "initial_glucose_6_phosphate",
        "label": "Initial Glucose 6 Phosphate",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.initial_glucose_6_phosphate",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `g6p`."
      },
      {
        "name": "initial_udp_glucose",
        "label": "Initial Udp Glucose",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.initial_udp_glucose",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `udg`."
      },
      {
        "name": "initial_glucose_1_phosphate",
        "label": "Initial Glucose 1 Phosphate",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.initial_glucose_1_phosphate",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `g1p`."
      },
      {
        "name": "initial_glucose_2",
        "label": "Initial Glucose 2",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.initial_glucose_2",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `glc`."
      },
      {
        "name": "initial_model_state_atp",
        "label": "Initial Model State ATP",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.initial_model_state_atp",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `atp`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.species_labels"
      },
      {
        "name": "glucose",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.glucose"
      },
      {
        "name": "glucose_6_phosphate",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.glucose_6_phosphate"
      },
      {
        "name": "udp_glucose",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.udp_glucose"
      },
      {
        "name": "glucose_1_phosphate",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.glucose_1_phosphate"
      },
      {
        "name": "glucose_2",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.glucose_2"
      },
      {
        "name": "atp",
        "maps_to": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.atp"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Smallbone2011 Trehalosebiosynthesis Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model",
      "alias": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model_state"
      ],
      "from": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model_summary"
      ],
      "from": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model_species_labels"
      ],
      "from": "systemsbiology_sbml_smallbone2011_trehalosebiosynthesis_biomd0000000380_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "This model is from the article: Building a Kinetic Model of Trehalose Biosynthesis in Saccharomyces cerevisiae. Smallbone K, Malys N, Messiha HL, Wishart JA, Simeonidis E.",
  "schema_version": "2.0"
}