About lab
. It can be used to explore systemsbiology chassagnole2001 threonine synthesis BioModels0000000066 dynamics and compare simulation behavior across conditions.
Runtime
Duration1
Comms Step0.1
Runs
Total0
Completed0
Failed0
Metadata
Packagechassagnole2001-threonine-synthesis
Created2026-05-17
Updated2026-06-13
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisationother
Manifest
{
"io": {
"inputs": [
{
"name": "initial_nadph",
"label": "Initial Nadph",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.initial_nadph",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `nadph`."
},
{
"name": "initial_nadp",
"label": "Initial Nadp",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.initial_nadp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `nadp`."
},
{
"name": "initial_model_state_atp",
"label": "Initial Model State ATP",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.initial_model_state_atp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `atp`."
},
{
"name": "initial_model_state_adp",
"label": "Initial Model State ADP",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.initial_model_state_adp",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `adp`."
},
{
"name": "initial_threonine",
"label": "Initial Threonine",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.initial_threonine",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `thr`."
},
{
"name": "initial_aspartate",
"label": "Initial Aspartate",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.initial_aspartate",
"description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `asp`."
}
],
"outputs": [
{
"name": "state",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.state"
},
{
"name": "summary",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.summary"
},
{
"name": "species_labels",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.species_labels"
},
{
"name": "nadph",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.nadph"
},
{
"name": "nadp",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.nadp"
},
{
"name": "atp",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.atp"
},
{
"name": "adp",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.adp"
},
{
"name": "threonine",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.threonine"
},
{
"name": "aspartate",
"maps_to": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.aspartate"
}
]
},
"tags": [
"systemsbiology",
"sbml",
"biomodels_ebi",
"faithful",
"curated"
],
"title": "Chassagnole2001 Threonine Synthesis Lab",
"models": [
{
"path": "models/core",
"alias": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model"
},
{
"path": "models/visualisation",
"alias": "visualisation"
}
],
"wiring": [
{
"to": [
"visualisation.systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model_state"
],
"from": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.state"
},
{
"to": [
"visualisation.systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model_summary"
],
"from": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.summary"
},
{
"to": [
"visualisation.systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model_species_labels"
],
"from": "systemsbiology_sbml_chassagnole2001_threonine_synthesis_biomd0000000066_model.species_labels"
}
],
"package": "chassagnole2001-threonine-synthesis",
"runtime": {
"duration": 1,
"initial_inputs": {},
"communication_step": 0.1
},
"version": "1.0.0",
"description": ". It can be used to explore systemsbiology chassagnole2001 threonine synthesis BioModels0000000066 dynamics and compare simulation behavior across conditions.",
"schema_version": "2.0"
}Sign in to start your own run. Public-lab history stays visible here.
Select a run from History to view its results.