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Wu2010 Rheumatoid Arthritis Map Layout Updated Lab

About lab

Contains molecular interactions known to be active in rheumatoid arthritis. It can be used to explore systemsbiology wu2010 rheumatoid arthritis map layout dynamics and compare simulation behavior across conditions.

Runtime

Duration1
Comms Step0.1

Runs

Total0
Completed0
Failed0

Metadata

Packagewu2010-rheumatoid-arthritis-map-layout-updated-lab
Created2026-05-17
Updated2026-05-17
systemsbiologysbmlbiomodels_ebifaithfulcuratedvisualisation

Manifest

{
  "io": {
    "inputs": [
      {
        "name": "initial_cell_growth_differentiation_morphogenesis",
        "label": "Initial Cell Growth Differentiation Morphogenesis",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_cell_growth_differentiation_morphogenesis",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s422`."
      },
      {
        "name": "initial_wnt_signaling_pathway",
        "label": "Initial Wnt Signaling Pathway",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_wnt_signaling_pathway",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s1181`."
      },
      {
        "name": "initial_traf6",
        "label": "Initial Traf6",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_traf6",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s360`."
      },
      {
        "name": "initial_traf6_2",
        "label": "Initial Traf6 2",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_traf6_2",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s359`."
      },
      {
        "name": "initial_traf6_3",
        "label": "Initial Traf6 3",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_traf6_3",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s36`."
      },
      {
        "name": "initial_traf3",
        "label": "Initial Traf3",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.initial_traf3",
        "description": "Source state initial condition exposed as a model-specific control because no explicit intervention parameter is identifiable. Maps to SBML symbol `s180`."
      }
    ],
    "outputs": [
      {
        "name": "state",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.state"
      },
      {
        "name": "summary",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.summary"
      },
      {
        "name": "species_labels",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.species_labels"
      },
      {
        "name": "cell_growth_differentiation_morphogenesis",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.cell_growth_differentiation_morphogenesis"
      },
      {
        "name": "wnt_signaling_pathway",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.wnt_signaling_pathway"
      },
      {
        "name": "traf6",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.traf6"
      },
      {
        "name": "traf6_2",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.traf6_2"
      },
      {
        "name": "traf6_3",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.traf6_3"
      },
      {
        "name": "traf3",
        "maps_to": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.traf3"
      }
    ]
  },
  "tags": [
    "systemsbiology",
    "sbml",
    "biomodels_ebi",
    "faithful",
    "curated"
  ],
  "title": "Wu2010 Rheumatoid Arthritis Map Layout Updated Lab",
  "models": [
    {
      "path": "owned/models/systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model",
      "alias": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model",
      "provenance": {
        "owned_path": "owned/models/systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model"
      }
    },
    {
      "path": "owned/models/visualisation",
      "alias": "visualisation",
      "provenance": {
        "owned_path": "owned/models/visualisation"
      }
    }
  ],
  "wiring": [
    {
      "to": [
        "visualisation.systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model_state"
      ],
      "from": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.state"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model_summary"
      ],
      "from": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.summary"
    },
    {
      "to": [
        "visualisation.systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model_species_labels"
      ],
      "from": "systemsbiology_sbml_wu2010_rheumatoid_arthritis_map_layout_updated_model2302140001_model.species_labels"
    }
  ],
  "runtime": {
    "duration": 1,
    "initial_inputs": {},
    "communication_step": 0.1
  },
  "description": "Contains molecular interactions known to be active in rheumatoid arthritis. It can be used to explore systemsbiology wu2010 rheumatoid arthritis map layout dynamics and compare simulation behavior across conditions.",
  "schema_version": "2.0"
}

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