About lab
Pharmacokinetic model of alkylresorcinols. Both plasma AR concentrations and urinary metabolites in 24-h samples showed a dose-response relation to increased AR intake, which strongly supports the hyp.
Runtime
Duration24
Comms Step1
Runs
Total0
Completed0
Failed0
Metadata
Packagelandberg2009-alkylresorcinol-dose-response-lab
Created2026-05-16
Updated2026-05-16
pharmacologypharmacokineticsnutritiondose-responsesbmltelluriumfaithfulbiomodels_ebivisualisation
Manifest
{
"io": {
"inputs": [
{
"name": "alkylresorcinol_dose",
"label": "Alkylresorcinol Dose",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.alkylresorcinol_dose"
},
{
"name": "fast_absorption_rate",
"label": "Fast Absorption Rate",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.fast_absorption_rate"
},
{
"name": "slow_absorption_rate",
"label": "Slow Absorption Rate",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.slow_absorption_rate"
},
{
"name": "clearance_over_volume",
"label": "Clearance Over Volume",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.clearance_over_volume"
},
{
"name": "baseline_concentration",
"label": "Baseline Concentration",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.baseline_concentration"
}
],
"outputs": [
{
"name": "state",
"label": "Tracked source state",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.state"
},
{
"name": "summary",
"label": "Simulation summary",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.summary"
},
{
"name": "species_labels",
"label": "Observable labels",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.species_labels"
},
{
"name": "alkylresorcinol_dose_pool",
"label": "Alkylresorcinol Dose Pool",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.alkylresorcinol_dose_pool"
},
{
"name": "alkylresorcinol_absorption_pool_1",
"label": "Alkylresorcinol Absorption Pool 1",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.alkylresorcinol_absorption_pool_1"
},
{
"name": "alkylresorcinol_absorption_pool_2",
"label": "Alkylresorcinol Absorption Pool 2",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.alkylresorcinol_absorption_pool_2"
},
{
"name": "alkylresorcinol_central_concentration",
"label": "Alkylresorcinol Central Concentration",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.alkylresorcinol_central_concentration"
},
{
"name": "bioavailability_fraction_1",
"label": "Bioavailability Fraction 1",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.bioavailability_fraction_1"
},
{
"name": "bioavailability_fraction_2",
"label": "Bioavailability Fraction 2",
"maps_to": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.bioavailability_fraction_2"
}
]
},
"tags": [
"pharmacology",
"pharmacokinetics",
"nutrition",
"dose-response",
"sbml",
"tellurium",
"faithful",
"biomodels_ebi"
],
"title": "Landberg2009 - Alkylresorcinol Dose Response Lab",
"models": [
{
"path": "owned/models/pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model",
"alias": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model",
"parameters": {
"model_path": "data/BIOMD0000000948.xml",
"integration_step": 0.1
},
"provenance": {
"owned_path": "owned/models/pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model"
}
},
{
"path": "owned/models/visualisation",
"alias": "visualisation",
"provenance": {
"owned_path": "owned/models/visualisation"
}
}
],
"wiring": [
{
"to": [
"visualisation.pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model_state"
],
"from": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.state"
},
{
"to": [
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],
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},
{
"to": [
"visualisation.pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model_species_labels"
],
"from": "pharmacology_sbml_landberg2009_alkylresorcinol_dose_response_biomd0000000948_model.species_labels"
}
],
"runtime": {
"duration": 24,
"initial_inputs": {},
"communication_step": 1
},
"description": "Pharmacokinetic model of alkylresorcinols. Both plasma AR concentrations and urinary metabolites in 24-h samples showed a dose-response relation to increased AR intake, which strongly supports the hyp.",
"schema_version": "2.0"
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